Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq7 129 7e-25 seq6 120 4e-22 seq12 86.0 7e-12 >seq7 Length=1353353 Score = 129 bits (142), Expect = 7e-25 Identities = 378/581 (65%), Gaps = 15/581 (3%) Strand=Plus/Minus Query 106730 TCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACC 106789 |||| ||| || | ||||| || ||||||||| || | ||| | ||| || ||||||| Sbjct 416179 TCGGCGAGTCCAGATGCCTCGTTTGGACAGAATAGTGTCCAATCGCCATTCTTCTCAACC 416120 Query 106790 CGCTTCATGAAAAGGTCTGGAATCCACAGGG--ATGAAAAGAGATCTCTACACCGAGCCT 106847 || |||||||| | ||| ||| |||| |||| | ||||||| |||| | | | Sbjct 416119 CGTTTCATGAACAAGTCGGGAGTCCAGAGGGCGAGGAAAAGA--TCTCGGGCTCTCACTT 416062 Query 106848 CTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT 106907 |||| | ||| || || || | || | ||||| | | || | |||||| || | Sbjct 416061 CTTCTTTACCATGATTTTTACGGAGGTCCAAAAACTCAAATACGTCAGAGTGCCAAGGTT 416002 Query 106908 CAAGATAGACTGCGATAGATCCC-------TTTCGACGCCCAGCTTGATTTACATAGCGC 106960 ||||||| | || | || || | | | ||||| |||| ||||| | Sbjct 416001 CAAGATAAATAGCAAAAGCACCAGGGCGTTTATTGCCGCCC----TGATCCACATATCTG 415946 Query 106961 GCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCC 107020 || || |||||| || |||||||| ||||| || |||| || |||||||| || Sbjct 415945 GCAGTATTGTTAAAGACACGAAGCATGGGAATGATCCCATTAGAGGAGCCATTTGTTCCT 415886 Query 107021 CGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCAC 107080 ||| || | | || | | || | || | |||||||||||||| | Sbjct 415885 GCAATGTAGGAGCCAGTTGCACGGATTCGGTGAACGTTGAGTCCAATACCCCCAGCAGTC 415826 Query 107081 TTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG 107140 || || || | ||||| | | || || ||||||| || | || |||||||| Sbjct 415825 TTGGAAATCAGAGCACATGTCTTCAGTGTATCATAGATCCCCTCAATACTATCCTCCTTC 415766 Query 107141 TTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTT 107200 | | ||||||||||| | |||||| ||| ||||| || |||||||| || || Sbjct 415765 ATATCAATAAGGAAGCAGGAAGCCATCTGTGGTTGAGGTGTTCCCGCATTGAAAAGTGTG 415706 Query 107201 GGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCA 107260 || | ||||| | || | |||||||||| || ||||||||| | | |||| Sbjct 415705 GGAGAAGCGTGGGTAAAAAATTTTTGGGACATCAGGTGGTATGTCTCAATCGCTTTATCA 415646 Query 107261 ATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301 ||||| || || || || | ||| || ||||||| ||| Sbjct 415645 ATGTCCTCATGATGAATACCAACGGCAACGCGCATAATCAT 415605 Score = 118 bits (130), Expect = 1e-21 Identities = 563/886 (64%), Gaps = 28/886 (3%) Strand=Plus/Minus Query 105752 ATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGA 105811 |||||||| || || ||| || ||||| ||||| ||||||| | ||||||||| Sbjct 417208 ATTTCCCATACAGTCTTGTAAAGGGCTTTGATGTCATCGGGGATATTGGGAATATTTTGA 417149 Query 105812 ATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTC 105871 ||||| || || | || ||| ||| ||||| | | |||||||| |||| | Sbjct 417148 ATTGAGCCACCATCAGCGATGATGCGATTTTTCATGTTGTCAGACCAAAGTCCAAGGTCA 417089 Query 105872 TTGAGATCATT--GACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTC 105929 ||||| || || | ||| ||| |||| || ||||| || ||| || | Sbjct 417088 ACAAGATCTTTCAGAAGCCATG--GGTTAACAACTTGGAATTCTCCTGCAAGGACTCGCC 417031 Query 105930 TCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGG 105989 |||||| || | ||||| || ||||||||||| || || | |||||| || Sbjct 417030 GAGAATAGATATTTGAGGTGTATGGCTCAAAGCATTCGTTGAAGCCAAGGATTTGGCTGG 416971 Query 105990 TGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACC--CTTTTCCTTGAT 106047 | || || ||||| || || | | ||||||||| || | ||| |||| || || Sbjct 416970 TACTAGCAGTGGGCATAGGGGCAACAAGAAGACTGTTGCGTACACCGTGTTTTGCT--AT 416913 Query 106048 GCGTTCCTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCA 106105 || ||| ||| | |||| | | || | || ||| | || || |||||||||| Sbjct 416912 TTCTTTCTTAAGAGAAACCCAATCCCAAAGGTCAG-AAGGTGTTACGTT-CCACATATCA 416855 Query 106106 AATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCT 106165 | || | | || || || |||||||| ||| |||| || || | |||| || Sbjct 416854 TACTGCAAAATTCCCTGAGAAACAGGAGAACCTTCATATGTTTCGTATGGGCCTTCGGTC 416795 Query 106166 TCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCA 106225 | | | ||| ||| || ||||| || || || || || |||||||| || | Sbjct 416794 TTTGAAAGTTCGCAGGATGCAGTCAGGGCGGCATGGTAAATTGTCTCAAAGATCTGAATA 416735 Query 106226 TTCATCTCCTTGGCTTCATCTGAATCAAATG-----CGTAGCGGCACAAAATAAATACAT 106280 |||| || ||| || | | || ||||| | ||||| | | | || ||| Sbjct 416734 TTCAGCTGCTTAGCCTGAGAGGAGTCAAAAGGCAAACGTAGAGCC-----AAGAAGGCAT 416680 Query 106281 CCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAG 106340 | ||||| |||||||| || | | |||| || | || || | ||| |||||| || Sbjct 416679 CAGCGAGTCCTTGAACCCCAAGAGCAATTGGGCGATGACGGAAGTTACTCTTTCGAGCTT 416620 Query 106341 TCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTG 106400 |||||| || || | ||||||| ||||| ||| |||| | | Sbjct 416619 CGGGAACGGGGTAGTGGTTGTTATCAATGATCTTGTTTAAATTGCGCACCACAACTTGGG 416560 Query 106401 TGATTTCATGAAGTTTTTCATAATCAAA---AGTGCGAGTCTCTTCATTGACATACTTTG 106457 ||| | | || | ||| || | || | ||| | | ||| || || ||| Sbjct 416559 TGACTGCGTGCAATTTACCAAAGTCGTACTCGCCGCGGATAGCGTCA---ACGTATGTTG 416503 Query 106458 GAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAA 106517 | | || | |||||| | |||||| || || ||||| | || ||||| | || Sbjct 416502 GCAAAGCAAGTGATGCTAGATTGCACACGGCGACTTCATCGGGGGCAGTATACTCAATAA 416443 Query 106518 TTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGT 106577 |||| ||||| || || ||||| |||| || || | ||||| ||||| ||||| | Sbjct 416442 TTTCCGTACATAAATTAGAACTTCTAATAGTTCCAAGGTTCTTCTGGTTGCTCTTCCGAT 416383 Query 106578 TGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 106623 | || ||||||||||| |||||| | || | || ||||| || || Sbjct 416382 TACAGGCATCCTTGTAAAGCATGAAAGGATTTCCAGTCTCGGTTTG 416337 >seq6 Length=1499889 Score = 120 bits (132), Expect = 4e-22 Identities = 295/445 (66%), Gaps = 12/445 (3%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || || ||||| ||||||||||| ||||||||||| || |||| ||||| ||||| Sbjct 77887 TAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGCAAGCGAGATGTTATCCATG 77946 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100 ||||| ||||| ||| | | ||| || | | || |||| | || | Sbjct 77947 AAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTG-----CCAAGAGCTACAAGTA 78001 Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160 || || | || |||| ||||| | | ||||| || |||||||| || | |||| Sbjct 78002 ACCGGTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTTCATGCCAAGGAGAG 78061 Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220 |||||| || || ||| | ||| ||| ||| || || || || || | | ||| | Sbjct 78062 CACATGGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCACGGCTTCAATGATGATTG 78121 Query 117221 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACT 117280 | | || ||| | |||| | | || | |||||| ||||| | Sbjct 78122 CTGCAACAGCTTCTGGGCTGGGACGGTGGCGGAGGTGAGAGAAGAGGAGGCAAGCAAAGT 78181 Query 117281 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGA 117340 | ||| |||||||| || || || || || || || ||||| ||||| ||||||| Sbjct 78182 CAGTGTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGGCCAGGCATGA 78241 Query 117341 GACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCC 117399 |||| |||||||| ||||| |||||| ||| || || || ||||||||||||||| Sbjct 78242 GACCACGCTTCTTTAACCAGAAAATAGAAGCA-AAAGAACCACTGAAGAAGATACCCTCA 78300 Query 117400 ACACACGCAAACGCAAAAAGGCGCT 117424 ||| || || |||| ||| |||| Sbjct 78301 ACAGCGGCGAAAGCAATAAGACGCT 78325 >seq12 Length=982140 Score = 86.0 bits (94), Expect = 7e-12 Identities = 164/237 (69%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 9362 CTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGAT 9421 ||| || | |||||| || || |||||||||| || || || |||| || ||| | Sbjct 522009 CTTGCCAATGGCATCGATTTCGTCAATGAAGATTATGCAAGGAGTGTTTTTTCGCGCGTT 521950 Query 9422 TTCAAAGAGATCGCGAACCCTTT-TGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9480 | | || ||||| ||||| | |||| || |||||||||||||| ||||| || | || Sbjct 521949 TGCGAAAAGATCACGAACACGAGATGGC-CCAACACCAACAAACATTTCCACGAACTCTG 521891 Query 9481 --CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAG 9538 | || || | || || || || ||| || || || |||| || || || Sbjct 521890 AACCGCTGACGCT--GAAAAATGGAACGCCAGACTCGCCGGCTGTGGCCTTCGCTAGTAG 521833 Query 9539 AGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 |||||||| |||||||| || | ||||| ||||| || |||||||| ||||| Sbjct 521832 TGTCTTACCGGTACCTGGTGGGCCAGAGAGGATAGCACCGCGGGGAATCTTAGCGCC 521776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980512384360