Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq6 143 3e-29 >seq6 Length=1499889 Score = 143 bits (158), Expect = 3e-29 Identities = 290/423 (69%), Gaps = 13/423 (3%) Strand=Plus/Plus Query 154711 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGG 154770 ||||| | || ||||| || | || ||||| ||||| || || || ||||||| ||||| Sbjct 688026 GAAATATCTGCTTGATTCCCGTCTCTGCACACGGAACGAACCCCGCCAGTGCTGCCATGG 688085 Query 154771 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGA---TGATGATGGTAACATAGACATCAAAG 154827 | || ||||| ||||| || |||||||| || | ||| || | ||| ||| || Sbjct 688086 CGGGAATGAAGGTTGTTCCAGTGAAGTGTGACACTGCTACTGGAAATCTTGACGTCACAG 688145 Query 154828 ATCTAGAGAAGAAAGCAATCATGAA--TACATTTGAACTGTCATGTATTATGATTACATA 154885 |||| || |||| ||| || || | |||||| | || |||||||| || Sbjct 688146 ATCTTC-GAGCAAAGTG-TCAGAAACATAAAGATGAACTAGGAGCCATCATGATTACTTA 688203 Query 154886 CCCATCTACACATGGTGTATTTGAA---ACTAACATTAGACAGATATGTAAGATCGTTCA 154942 || || |||||| | ||| |||| || || || | ||| | |||||||| Sbjct 688204 TCCTAGCACCTTTGGTGTCTATGAGCCCACTATCA--AGGAAGTT-TGTGACATCGTTCA 688260 Query 154943 TGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGC 155002 || |||||| ||||| ||| | ||||| || || | ||||||||| | || || Sbjct 688261 CGAATTTGGTGGCCAGGTGTATATGGATGGTGCCAACATGAATGCACAGATTGGCCTCTG 688320 Query 155003 AAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTAT 155062 ||| |||| ||| || || || || || || ||| | ||||| || |||||||| Sbjct 688321 CTCTCCAGGTGAAATTGGAGCCGACGTGTGCCACCTTAACCTCCATAAGACTTTCTGTAT 688380 Query 155063 TCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAAACATCTCACACC 155122 ||| || ||||||||||| || || || || ||||| || || || ||||||| ||| Sbjct 688381 TCCTCACGGAGGTGGAGGCCCAGGAGTTGGACCTATCGGCGTCGCGGAACATCTTCGACC 688440 Query 155123 ATT 155125 ||| Sbjct 688441 ATT 688443 Score = 125 bits (138), Expect = 8e-24 Identities = 189/269 (70%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806 |||||||| | || | | |||||| | ||| | || ||||| | ||| || || ||| Sbjct 687014 GATATTGCCTTTGGAAATGCGCAAAGACTCGGTGTGCCCATGGGTTTTGGCGGCCCCCAT 687073 Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 153866 ||||| ||||| || || ||||||||||| | || || || ||| | || || ||| Sbjct 687074 GCTGCTTTCTTCGCCTGTACCGACAAGTATAAACGTAAAATCCCAGGCCGTATCGTTGGT 687133 Query 153867 CAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 153926 ||| ||| || || || || | | | || || |||||| | || ||| Sbjct 687134 GTTTCAAAAGACCGTCTCGGAAACCGTGCCTTGCGGCTTGCGCTCCAGACTCGTGAACAG 687193 Query 153927 CATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986 ||||| | |||| ||||| ||||| || || ||||| ||||| ||||||||||||||| Sbjct 687194 CATATTCGACGAGAAAAAGCCACCAGCAATATTTGCACTGCTCAAGCACTGCTGGCTAAT 687253 Query 153987 ATGTCTGGATTCTATGCAGCATATCATGG 154015 ||| ||| | ||||||| |||||||| Sbjct 687254 ATGACTGCCATGTATGCAGTGTATCATGG 687282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212517633760