Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq6 143 3e-29
>seq6
Length=1499889
Score = 143 bits (158), Expect = 3e-29
Identities = 290/423 (69%), Gaps = 13/423 (3%)
Strand=Plus/Plus
Query 154711 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGG 154770
||||| | || ||||| || | || ||||| ||||| || || || ||||||| |||||
Sbjct 688026 GAAATATCTGCTTGATTCCCGTCTCTGCACACGGAACGAACCCCGCCAGTGCTGCCATGG 688085
Query 154771 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGA---TGATGATGGTAACATAGACATCAAAG 154827
| || ||||| ||||| || |||||||| || | ||| || | ||| ||| ||
Sbjct 688086 CGGGAATGAAGGTTGTTCCAGTGAAGTGTGACACTGCTACTGGAAATCTTGACGTCACAG 688145
Query 154828 ATCTAGAGAAGAAAGCAATCATGAA--TACATTTGAACTGTCATGTATTATGATTACATA 154885
|||| || |||| ||| || || | |||||| | || |||||||| ||
Sbjct 688146 ATCTTC-GAGCAAAGTG-TCAGAAACATAAAGATGAACTAGGAGCCATCATGATTACTTA 688203
Query 154886 CCCATCTACACATGGTGTATTTGAA---ACTAACATTAGACAGATATGTAAGATCGTTCA 154942
|| || |||||| | ||| |||| || || || | ||| | ||||||||
Sbjct 688204 TCCTAGCACCTTTGGTGTCTATGAGCCCACTATCA--AGGAAGTT-TGTGACATCGTTCA 688260
Query 154943 TGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGC 155002
|| |||||| ||||| ||| | ||||| || || | ||||||||| | || ||
Sbjct 688261 CGAATTTGGTGGCCAGGTGTATATGGATGGTGCCAACATGAATGCACAGATTGGCCTCTG 688320
Query 155003 AAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTAT 155062
||| |||| ||| || || || || || || ||| | ||||| || ||||||||
Sbjct 688321 CTCTCCAGGTGAAATTGGAGCCGACGTGTGCCACCTTAACCTCCATAAGACTTTCTGTAT 688380
Query 155063 TCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAAACATCTCACACC 155122
||| || ||||||||||| || || || || ||||| || || || ||||||| |||
Sbjct 688381 TCCTCACGGAGGTGGAGGCCCAGGAGTTGGACCTATCGGCGTCGCGGAACATCTTCGACC 688440
Query 155123 ATT 155125
|||
Sbjct 688441 ATT 688443
Score = 125 bits (138), Expect = 8e-24
Identities = 189/269 (70%), Gaps = 0/269 (0%)
Strand=Plus/Plus
Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806
|||||||| | || | | |||||| | ||| | || ||||| | ||| || || |||
Sbjct 687014 GATATTGCCTTTGGAAATGCGCAAAGACTCGGTGTGCCCATGGGTTTTGGCGGCCCCCAT 687073
Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 153866
||||| ||||| || || ||||||||||| | || || || ||| | || || |||
Sbjct 687074 GCTGCTTTCTTCGCCTGTACCGACAAGTATAAACGTAAAATCCCAGGCCGTATCGTTGGT 687133
Query 153867 CAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 153926
||| ||| || || || || | | | || || |||||| | || |||
Sbjct 687134 GTTTCAAAAGACCGTCTCGGAAACCGTGCCTTGCGGCTTGCGCTCCAGACTCGTGAACAG 687193
Query 153927 CATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986
||||| | |||| ||||| ||||| || || ||||| ||||| |||||||||||||||
Sbjct 687194 CATATTCGACGAGAAAAAGCCACCAGCAATATTTGCACTGCTCAAGCACTGCTGGCTAAT 687253
Query 153987 ATGTCTGGATTCTATGCAGCATATCATGG 154015
||| ||| | ||||||| ||||||||
Sbjct 687254 ATGACTGCCATGTATGCAGTGTATCATGG 687282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579212517633760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |