Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq6 132 6e-26 >seq6 Length=1499889 Score = 132 bits (146), Expect = 6e-26 Identities = 284/420 (68%), Gaps = 7/420 (2%) Strand=Plus/Plus Query 159386 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGG 159445 ||||| | || ||||| || | || ||||| ||||| || || || || | |||| Sbjct 688026 GAAATATCTGCTTGATTCCCGTCTCTGCACACGGAACGAACCCCGCCAGTGCTGCCATGG 688085 Query 159446 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGA---TGATGATGGCAACATAGACATCAAAG 159502 | || ||||| ||||| || |||||||| || | ||| || | ||| ||| || Sbjct 688086 CGGGAATGAAGGTTGTTCCAGTGAAGTGTGACACTGCTACTGGAAATCTTGACGTCACAG 688145 Query 159503 ATCTAGAGAAGAAAGCAATCATGAA--TACATTTGAACTGTCATGTATTATGATTACATA 159560 |||| || |||| ||| || || | |||||| | || |||||||| || Sbjct 688146 ATCTTC-GAGCAAAGTG-TCAGAAACATAAAGATGAACTAGGAGCCATCATGATTACTTA 688203 Query 159561 TCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGA 159620 ||| || |||||| | ||| | | |||| | | ||| | || ||||| || Sbjct 688204 TCCTAGCACCTTTGGTGTCTATGAGCCCACTATCAAGGAAGTTTGTGACATCGTTCACGA 688263 Query 159621 GAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAA 159680 |||||| ||||| ||| | |||||||| || | ||||||||| | || || Sbjct 688264 ATTTGGTGGCCAGGTGTATATGGATGGTGCCAACATGAATGCACAGATTGGCCTCTGCTC 688323 Query 159681 ACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCC 159740 ||| |||| ||| || || || || || || ||| | |||||||| ||||||||||| Sbjct 688324 TCCAGGTGAAATTGGAGCCGACGTGTGCCACCTTAACCTCCATAAGACTTTCTGTATTCC 688383 Query 159741 ACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATCTCACACCATT 159800 || ||||||||||| || || || || ||||| || || || ||||||| |||||| Sbjct 688384 TCACGGAGGTGGAGGCCCAGGAGTTGGACCTATCGGCGTCGCGGAACATCTTCGACCATT 688443 Score = 116 bits (128), Expect = 4e-21 Identities = 175/249 (70%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 158442 GCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAAC 158501 |||||| | ||| | || ||||| | || || || |||||||| ||||| || || Sbjct 687034 GCAAAGACTCGGTGTGCCCATGGGTTTTGGCGGCCCCCATGCTGCTTTCTTCGCCTGTAC 687093 Query 158502 AGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGG 158561 ||||||||||| | || || || ||| | || || ||| ||| ||| | || Sbjct 687094 CGACAAGTATAAACGTAAAATCCCAGGCCGTATCGTTGGTGTTTCAAAAGACCGTCTCGG 687153 Query 158562 TAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGC 158621 || || | | | || || |||||| | || |||||||| || |||| ||||| Sbjct 687154 AAACCGTGCCTTGCGGCTTGCGCTCCAGACTCGTGAACAGCATATTCGACGAGAAAAAGC 687213 Query 158622 AACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGC 158681 ||||| || || ||||| || ||||||||||||||||||||| ||| | ||||||| Sbjct 687214 CACCAGCAATATTTGCACTGCTCAAGCACTGCTGGCTAATATGACTGCCATGTATGCAGT 687273 Query 158682 ATATCATGG 158690 |||||||| Sbjct 687274 GTATCATGG 687282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050913325040