Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq6 132 6e-26
>seq6
Length=1499889
Score = 132 bits (146), Expect = 6e-26
Identities = 284/420 (68%), Gaps = 7/420 (2%)
Strand=Plus/Plus
Query 159386 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGG 159445
||||| | || ||||| || | || ||||| ||||| || || || || | ||||
Sbjct 688026 GAAATATCTGCTTGATTCCCGTCTCTGCACACGGAACGAACCCCGCCAGTGCTGCCATGG 688085
Query 159446 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGA---TGATGATGGCAACATAGACATCAAAG 159502
| || ||||| ||||| || |||||||| || | ||| || | ||| ||| ||
Sbjct 688086 CGGGAATGAAGGTTGTTCCAGTGAAGTGTGACACTGCTACTGGAAATCTTGACGTCACAG 688145
Query 159503 ATCTAGAGAAGAAAGCAATCATGAA--TACATTTGAACTGTCATGTATTATGATTACATA 159560
|||| || |||| ||| || || | |||||| | || |||||||| ||
Sbjct 688146 ATCTTC-GAGCAAAGTG-TCAGAAACATAAAGATGAACTAGGAGCCATCATGATTACTTA 688203
Query 159561 TCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGA 159620
||| || |||||| | ||| | | |||| | | ||| | || ||||| ||
Sbjct 688204 TCCTAGCACCTTTGGTGTCTATGAGCCCACTATCAAGGAAGTTTGTGACATCGTTCACGA 688263
Query 159621 GAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAA 159680
|||||| ||||| ||| | |||||||| || | ||||||||| | || ||
Sbjct 688264 ATTTGGTGGCCAGGTGTATATGGATGGTGCCAACATGAATGCACAGATTGGCCTCTGCTC 688323
Query 159681 ACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCC 159740
||| |||| ||| || || || || || || ||| | |||||||| |||||||||||
Sbjct 688324 TCCAGGTGAAATTGGAGCCGACGTGTGCCACCTTAACCTCCATAAGACTTTCTGTATTCC 688383
Query 159741 ACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATCTCACACCATT 159800
|| ||||||||||| || || || || ||||| || || || ||||||| ||||||
Sbjct 688384 TCACGGAGGTGGAGGCCCAGGAGTTGGACCTATCGGCGTCGCGGAACATCTTCGACCATT 688443
Score = 116 bits (128), Expect = 4e-21
Identities = 175/249 (70%), Gaps = 0/249 (0%)
Strand=Plus/Plus
Query 158442 GCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAAC 158501
|||||| | ||| | || ||||| | || || || |||||||| ||||| || ||
Sbjct 687034 GCAAAGACTCGGTGTGCCCATGGGTTTTGGCGGCCCCCATGCTGCTTTCTTCGCCTGTAC 687093
Query 158502 AGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGG 158561
||||||||||| | || || || ||| | || || ||| ||| ||| | ||
Sbjct 687094 CGACAAGTATAAACGTAAAATCCCAGGCCGTATCGTTGGTGTTTCAAAAGACCGTCTCGG 687153
Query 158562 TAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGC 158621
|| || | | | || || |||||| | || |||||||| || |||| |||||
Sbjct 687154 AAACCGTGCCTTGCGGCTTGCGCTCCAGACTCGTGAACAGCATATTCGACGAGAAAAAGC 687213
Query 158622 AACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGC 158681
||||| || || ||||| || ||||||||||||||||||||| ||| | |||||||
Sbjct 687214 CACCAGCAATATTTGCACTGCTCAAGCACTGCTGGCTAATATGACTGCCATGTATGCAGT 687273
Query 158682 ATATCATGG 158690
||||||||
Sbjct 687274 GTATCATGG 687282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588050913325040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |