Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq9 163 6e-35
seq5 100 6e-16
seq2 87.8 4e-12
>seq9
Length=1275601
Score = 163 bits (180), Expect = 6e-35
Identities = 164/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
|||||||||||| || || ||||||||||| || |||||||| | || || | || ||
Sbjct 1015630 CAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGACAGTGTGCGGCCGTC 1015571
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
||||| || ||||| |||||||| || ||||| |||||||| || || |||||||| ||
Sbjct 1015570 CTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGGATACCTTCTTTATC 1015511
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
|||||| ||| |||||||| || || || || ||| || ||||| | || | ||
Sbjct 1015510 TTGAATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAACTTCTAATGTGATTGT 1015451
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| || || ||||||||||| | ||||||
Sbjct 1015450 TTTTCCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418
Score = 143 bits (158), Expect = 6e-29
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| ||||||||||| || ||||| |||||||| | || || | ||||| |||
Sbjct 1015398 ACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGACCATCCTCG 1015339
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| || ||||| |||||||| | |||||| ||||| || || |||||||||||||| ||
Sbjct 1015338 AGTTGTTTACCAGCGAAGATCAATCGTTGCTGGTCGGGGGGGATGCCTTCTTTGTCCTGG 1015279
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || || || || || ||||| || ||| || || |||||||||| |||||
Sbjct 1015278 ATCTTGGTTTTCACATTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTAATAGTCTTG 1015219
Query 195112 CCTGTCAAAGTTTTTAC 195128
|| || | ||| || ||
Sbjct 1015218 CCAGTAAGAGTCTTGAC 1015202
Score = 120 bits (132), Expect = 7e-22
Identities = 144/194 (74%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 194949 CTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAA 195008
||| || || || ||||| |||| || || | |||||||| ||||| ||||| |||||
Sbjct 1015094 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCAAGCTGTTTACCAGCGAA 1015035
Query 195009 GATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTT 195068
|| | ||||||||||||||||| ||||| || |||||||| || || ||| || ||
Sbjct 1015034 AATCAAGCGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCTTGGATCTTAGTCTTAACATT 1014975
Query 195069 CTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTT 195126
|||||||| | | | || || || |||||||| | ||||| || |||| || ||
Sbjct 1014974 ATCAATGGTATCGCTGGAC--TCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTG 1014917
Query 195127 ACGAACACTTGCAT 195140
||||| | |||||
Sbjct 1014916 ACGAAGATCTGCAT 1014903
>seq5
Length=1732373
Score = 100 bits (110), Expect = 6e-16
Identities = 132/182 (73%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
||||| ||||| |||||| | ||| | ||||| || |||||||| || ||||| ||
Sbjct 840094 TTTTGGATATTATAATCGCTCAAAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAAATC 840153
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
| ||| ||||||||||| ||||| || || ||||| ||||| || |||||| || |||
Sbjct 840154 AATCGCTGTTGGTCTGGCGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTATCA 840213
Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129
|| || || ||| || || ||||| || | ||||| || || | || || |||
Sbjct 840214 ATTGTATCGCTCGA---CTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTAACG 840270
Query 195130 AA 195131
||
Sbjct 840271 AA 840272
>seq2
Length=1931404
Score = 87.8 bits (96), Expect = 4e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||||||||| |||||||| || || || ||||| || | || || | ||||| ||
Sbjct 802217 ACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCC 802158
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||| || || ||||| || || || || ||||| || || ||||| || |||||| ||
Sbjct 802157 AGCTGTTTGCCGGCGAAAATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTAGA 802098
Query 195052 ATTTTT 195057
||||
Sbjct 802097 GGTTTT 802092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481045605913
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |