Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq9 109 4e-19
seq2 84.2 1e-11
>seq9
Length=1275601
Score = 109 bits (120), Expect = 4e-19
Identities = 165/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 34752 TTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCC 34811
|||||||| | ||| |||||||||||||| | ||||| |||||||| || || |||||
Sbjct 1015875 TTTCCTCCACGCAATCTCAAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAGTCT 1015816
Query 34812 GAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGC 34871
||||| | || |||| || || || || |||||||| || || || || ||||| |
Sbjct 1015815 GAAAGCGTACGGCCATCTTCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGT 1015756
Query 34872 GGCACCCCCTCCTTGTCGCTAATCTTCTGT-TTGACGGATGCTATCGATTCACCGGCCTC 34930
|| | || ||||| || || | || ||| ||||| | |||| || | ||
Sbjct 1015755 GGAATACCTTCCTTATC-CTGAATTTTTGTCTTGACATTGTCAATCGTGTCCGAAGATTC 1015697
Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||| || | || ||||| || || || || || || ||||| |||||||||
Sbjct 1015696 AACTTCTAATGTGATGGTCTTGCCGGTAAGTGTTTTGACAAAAATCTGCATA 1015645
Score = 100 bits (110), Expect = 2e-16
Identities = 152/214 (71%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || || ||||| ||||| ||||| || ||| | || |||| ||
Sbjct 1015111 ACCAAGTGGAGGGTACTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCA 1015052
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| || || || || | ||||| |||||| | || | |||||||||||
Sbjct 1015051 AGCTGTTTACCAGCGAAAATCAAGCGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCTTGG 1014992
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948
||||| || || || |||| || || | || ||| || || | ||| |||||
Sbjct 1014991 ATCTTAGTCTTAAC--AT--TATCAATGGTATCGCTGGACTCGACCTCAAGGGTGATGGT 1014936
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || || || ||||| || ||||||||||||
Sbjct 1014935 CTTGCCAGTCAGGGTCTTGACGAAGATCTGCATA 1014902
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| || | ||||| |||||| | ||| | || ||||| || ||||| || || ||
Sbjct 1015644 CCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGAC 1015585
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
|| | || | || || || ||||| ||||| || ||||| |||||||||||| | ||
Sbjct 1015584 AGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGG 1015525
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| || || || || |||||| ||||||| | |||| ||| | ||||||
Sbjct 1015524 ATACCTTCTTTATCTTGAATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAACT 1015465
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| | || || |||||||| || | || || || || || ||||||
Sbjct 1015464 TCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCATA 1015417
>seq2
Length=1931404
Score = 84.2 bits (92), Expect = 1e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837
||||| ||| || ||||| ||||| |||||||| ||| | || |||| ||||||||
Sbjct 802212 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCCAGCTG 802153
Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
||| ||||| || || || || |||||||| | || | |||||||||||
Sbjct 802152 TTTGCCGGCGAAAATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 802102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633445697592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |