Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq7 165 9e-36
seq6 98.7 1e-15
>seq7
Length=1353353
Score = 165 bits (182), Expect = 9e-36
Identities = 458/698 (66%), Gaps = 12/698 (2%)
Strand=Plus/Minus
Query 48117 TATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACAC 48176
|||| || ||| ||||| || || || |||| | | |||| || || |||||
Sbjct 416209 TATAGCTGCTCGAATTCGTCTCCGTAGACATCGGCGAGTCCAGATGCCTCGTTTGGACAG 416150
Query 48177 ATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGA 48236
| | || |||||| ||| || | || | |||| || | || || |||| ||
Sbjct 416149 AATAGTGTCCAATCGCCATTCTTCTCAACCCGTTTCATGAACAAGTCGGGAGTCCAGAGG 416090
Query 48237 GCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTA---AGTTCA 48293
|| | || | ||| | | ||| | |||||| || ||| ||| |||| || ||
Sbjct 416089 GCGAGGAAAAGATCTCGGGCTCTCACTTCTTCTTTACCATGATT---TTTACGGAGGTCC 416033
Query 48294 AGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGT 48353
| ||| || | || |||| ||||| ||||| | ||| || || | |||| || |||
Sbjct 416032 AAAAACTCAAATACGTCAGAGTGCCAAGGTTCAAGATAAATAGCAAAAGCACCAGGGCGT 415973
Query 48354 TTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACA 48413
||||| || || ||||| | ||||||||||||||||||| | || | | ||| || |
Sbjct 415972 TTATTGCCGCCCTGATCCACATATCTGGCAGTATTGTTAAAGACACGAAGCATGGGAATG 415913
Query 48414 ATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTA 48473
|| ||||| || ||||| ||||| | ||| || ||| | || | || |
Sbjct 415912 ATCCCATTAGAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTTGCACGGATTCGGTGA 415853
Query 48474 A--TTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTAT 48531
| ||| | || ||||| || || | || || || |||||||| || || ||||
Sbjct 415852 ACGTTG--AGTCCAATACCCCCAGCAGTCTTGGAAATCAGAGCACATGTCTTCAGTGTAT 415795
Query 48532 CATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCG 48591
|||| || || || |||||||| || |||||| | || || || || ||| || |
Sbjct 415794 CATAGATCCCCTCAATACTATCCTCCTTCATATCAATAAGGAAGCAGGAAGCCATCTGTG 415735
Query 48592 GATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATA 48651
| ||| ||||| | ||| || | ||| ||||| || || |||| |||| | || |
Sbjct 415734 GTTGAGGTGTTCCCGCATTGAAAAGTGTGGGAGAAGCGTGGGTAAAAAATTTTTGGGACA 415675
Query 48652 ACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACAC 48711
|| | ||||| ||||| | ||| || ||| ||||| ||||| | | || |
Sbjct 415674 TCAGGTGGTATGTCTCAATCGCTTTATCAATGTCCTCATGATGAATACCAACGGCAACGC 415615
Query 48712 GCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATT 48771
|||| | ||||| || || | |||| ||| |||| || ||| | | ||||| ||
Sbjct 415614 GCATAATCATATGCTGCGGACGTTCAGCAACTTTGCCGTTGATTCTTAGTAGATACGACC 415555
Query 48772 TTTCCAATGTTTTAAAACCAAAATAGTTGTA--TGAAA 48807
| |||| ||| || || ||||| || | ||| |||||
Sbjct 415554 TCTCCAGTGTCTTGAACCCAAAGTACTGGTAGTTGAAA 415517
>seq6
Length=1499889
Score = 98.7 bits (108), Expect = 1e-15
Identities = 226/335 (67%), Gaps = 9/335 (3%)
Strand=Plus/Plus
Query 19186 GTCTCTATAGAATTAAATAGATACATACGCT-CATCTGTATCTTTAACATATGCATCTAT 19244
|| || |||| || ||| ||||| |||| | | || || ||||| | |||| || ||
Sbjct 78451 GTATCGATAGCATCAAAGAGATAGGTACGTTGCTTCGGT-TCTTTGATGTATGTGTCAAT 78509
Query 19245 CAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACA 19304
|| | ||| |||||||||| || ||||| || ||||||||||| || |||||
Sbjct 78510 CAGAAGGGAGTATGTTTCTGAATGGATGTTTTCCATCATGATCTGAAATCCATAGAAACA 78569
Query 19305 TCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTAT 19364
| || |||| || || ||||||| || || | || || | || || || || ||
Sbjct 78570 ACGGGCCTCTGGGATTTGGACTTCACCACTGAAGCGCTCCACAAGGTTCTCGTTGACAAT 78629
Query 19365 TCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAAT---GTTTTTCATC--T 19419
||| ||| ||| || || ||||| | ||| | | ||| | | | ||||| |
Sbjct 78630 TCCGTCAGAAGCGGCGAAGAATGCCAGCACACGAGAGACAAAGTATCGCTCGTCATCATT 78689
Query 19420 GAGGTTAATGTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAA 19479
||| || || ||||| || | || |||||| || || || | || ||| | |||||
Sbjct 78690 GAGTTTGTTG--TTCCAGTCGTGAAGATCTTTGGACAAGTCGATCTCCTCAGCAGTCCAG 78747
Query 19480 AAAGAAGCCTCTGCTTTTTTATACATGTTCCATAT 19514
||||| || || || || || ||||| | ||| ||
Sbjct 78748 AAAGATGCTTCAGCCTTCTTGTACATTTGCCAGAT 78782
Score = 89.7 bits (98), Expect = 6e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020
|| ||||| ||| || || |||||||| | | |||| || || || || || |
Sbjct 78172 CAAGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGG 78231
Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080
|||||||| || || | || ||||||||||| ||||||||||| || ||| |||||
Sbjct 78232 CCAGGCATGAGACCACGCTTCTTTAACCAGAAAATAGAAGCAAAAGAACCACTGAAGAAG 78291
Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA 19140
||||| || || || || ||||||| || | | | || | | | ||| ||| ||
Sbjct 78292 ATACCCTCAACAGCGGCGAAAGCAATAAGACGCTGTGCAAATGTGGATTCACTATCCTGG 78351
Query 19141 ATCCATTTCAGTGCCCAATCAGCCTTCTT 19169
|||||| | ||||| || || |||||
Sbjct 78352 ATCCATCGAATAGCCCAGTCGGCTTTCTT 78380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108525971960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |