Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq9 123 2e-23
>seq9
Length=1275601
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 101252 AAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311
|| || ||||| | || |||||||| |||||||| || |||||||| | | || | |
Sbjct 1015635 AACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGACAGTGTGCGG 1015576
Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371
| || || | ||| ||||| || || || | || || || || || || || ||||||
Sbjct 1015575 CCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGGATACCTTCT 1015516
Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431
||||||||||| ||| ||| || | || | || ||||| | || ||||| | |||
Sbjct 1015515 TTATCTTGAATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAACTTCTAATGTG 1015456
Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482
| ||||| |||||||| |||||||| || || ||||| ||||||||
Sbjct 1015455 ATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCATACCACCGCGAAGA 1015405
Score = 87.8 bits (96), Expect = 1e-12
Identities = 135/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| || || || || || || || |||||||| | || || | |||| || | |||
Sbjct 1015392 TGGAGAGTGGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGACCATCCTCGAGTTGT 1015333
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| || || ||||| || || || ||||| || ||||||||||| || || || ||
Sbjct 1015332 TTACCAGCGAAGATCAATCGTTGCTGGTCGGGGGGGATGCCTTCTTTGTCCTGGATCTTG 1015273
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| ||| | || | || ||||| | || || ||||| || | || ||||| ||
Sbjct 1015272 GTTTTCACATTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTAATAGTCTTGCCAGTA 1015213
Query 101447 AAAGTTTTTACAA 101459
| ||| || ||||
Sbjct 1015212 AGAGTCTTGACAA 1015200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396278211643923
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |