Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq9 123 2e-23 >seq9 Length=1275601 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 101252 AAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311 || || ||||| | || |||||||| |||||||| || |||||||| | | || | | Sbjct 1015635 AACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGACAGTGTGCGG 1015576 Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371 | || || | ||| ||||| || || || | || || || || || || || |||||| Sbjct 1015575 CCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGGATACCTTCT 1015516 Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431 ||||||||||| ||| ||| || | || | || ||||| | || ||||| | ||| Sbjct 1015515 TTATCTTGAATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAACTTCTAATGTG 1015456 Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 | ||||| |||||||| |||||||| || || ||||| |||||||| Sbjct 1015455 ATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCATACCACCGCGAAGA 1015405 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || || || || || || || |||||||| | || || | |||| || | ||| Sbjct 1015392 TGGAGAGTGGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGACCATCCTCGAGTTGT 1015333 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| || || ||||| || || || ||||| || ||||||||||| || || || || Sbjct 1015332 TTACCAGCGAAGATCAATCGTTGCTGGTCGGGGGGGATGCCTTCTTTGTCCTGGATCTTG 1015273 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| | || | || ||||| | || || ||||| || | || ||||| || Sbjct 1015272 GTTTTCACATTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTAATAGTCTTGCCAGTA 1015213 Query 101447 AAAGTTTTTACAA 101459 | ||| || |||| Sbjct 1015212 AGAGTCTTGACAA 1015200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278211643923