Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq9 91.5 1e-13
>seq9
Length=1275601
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
||| ||||| || || ||||||||||| || |||||||| || || || | || | ||
Sbjct 1015858 CAAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAGTCTGAAAGCGTACGGCCATC 1015799
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|| | ||||| |||||||| || || |||||||| || | |||| || ||||| ||
Sbjct 1015798 TTCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGAATACCTTCCTTATC 1015739
Query 48674 GCTAATCTTTTGT-TTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCG 48732
|| | |||||| || ||| | | | || || | || || || | || || |
Sbjct 1015738 -CTGAATTTTTGTCTTGACATTGTCAATCGTGTCCGAAGATTCAACTTCTAATGTGATGG 1015680
Query 48733 TTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
| || || || | ||||| ||||||||||||||
Sbjct 1015679 TCTTGCCGGTAAGTGTTTTGACAAAAATCTGCAT 1015646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937418935597
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |