Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq6 107 4e-18
seq7 84.2 4e-11
>seq6
Length=1499889
Score = 107 bits (118), Expect = 4e-18
Identities = 293/449 (65%), Gaps = 9/449 (2%)
Strand=Plus/Minus
Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936
|||| || | || || || ||||| ||||| ||||| ||||| ||||| ||||| | |
Sbjct 78325 AGCGTCTTATTGCTTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGTTCTTTTGCTTCTA 78266
Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATC 25995
| |||||| | ||| || || |||||| || || |||||| ||||||||||| |||
Sbjct 78265 TTTTCTGGTTAAAGAAGCGTGGTCTCATGCCTGGCCT-TACTTTCTCCAACGAGCTGATC 78207
Query 25996 AGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTC 26055
| ||||||||||| |||| || ||||| ||||| |||| | | ||| | | |
Sbjct 78206 TCTCGTGACGAGGGTCTTCACACTGACTTTGCTTGCCTCCTCTTCTC---TCACCTCCGC 78150
Query 26056 CACAAACCTTCTCAAGAGACCGTCTACAG-TATCATCAAAGAGGCTGTGGAGATCGAGAA 26114
||| || | ||| | || | ||| ||||||| || || ||||| |||||| |
Sbjct 78149 CACCGTCCCAGCCCAGAAGCTGT-TGCAGCAATCATCATTGAAGCCGTGGAAATCGAGCA 78091
Query 26115 GGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAG 26174
|| || | ||||||||| || | ||| |
Sbjct 78090 AGAATTCTTAACGGATGCTCTTCCATGTGCTCTCCTTGGCATGAACTCCAAGTTGATGTG 78031
Query 26175 CCAATACATTGAGTATGTGGCCGACCATCTGC-TGTGCCAGCTGGGACTCGCCAGACTCT 26233
||||||||| |||| || ||||||| | | ||| | || || | | || |
Sbjct 78030 CCAATACATCGAGTTCGTAGCCGACCGGTTACTTGTAGC-TCTTGGCAACAAGAAACATT 77972
Query 26234 ACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACT 26293
| | | | ||||| |||||||| ||||| ||||| ||| | | || ||||||||||
Sbjct 77971 ATAACTCCACGAACCCATTCGACTTCATGGATAACATCTCGCTTGCCGGCAAGACCAACT 77912
Query 26294 TCTTTGAAAAGAGGGTCGGCGACTATCAA 26322
| ||||| ||| | || ||||| || |||
Sbjct 77911 TTTTTGAGAAGCGTGTTGGCGATTACCAA 77883
>seq7
Length=1353353
Score = 84.2 bits (92), Expect = 4e-11
Identities = 124/172 (72%), Gaps = 4/172 (2%)
Strand=Plus/Minus
Query 222032 ACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGG-TC-CGCT 222089
|||| | |||||| | ||| || |||| || || | || ||||||| || || | ||
Sbjct 416122 ACCCGTTTCATGAACAAGTCGGGAGTCCAGAGGGCGAGGAAAAGATCTCGGGCTCTCACT 416063
Query 222090 GCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACG 222149
|| || || | | ||||| | || |||||||||||||| | ||||| |||||| |
Sbjct 416062 TCTTCTTTAC--CATGATTTTTACGGAGGTCCAAAAACTCAAATACGTCAGAGTGCCAAG 416005
Query 222150 GCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201
| || ||||| | || | ||| || || || || ||||| |||||||||||
Sbjct 416004 GTTCAAGATAAATAGCAAAAGCACCAGGGCGTTTATTGCCGCCCTGATCCAC 415953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844347188160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |