Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq6 107 4e-18 seq7 84.2 4e-11 >seq6 Length=1499889 Score = 107 bits (118), Expect = 4e-18 Identities = 293/449 (65%), Gaps = 9/449 (2%) Strand=Plus/Minus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| || | || || || ||||| ||||| ||||| ||||| ||||| ||||| | | Sbjct 78325 AGCGTCTTATTGCTTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGTTCTTTTGCTTCTA 78266 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATC 25995 | |||||| | ||| || || |||||| || || |||||| ||||||||||| ||| Sbjct 78265 TTTTCTGGTTAAAGAAGCGTGGTCTCATGCCTGGCCT-TACTTTCTCCAACGAGCTGATC 78207 Query 25996 AGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTC 26055 | ||||||||||| |||| || ||||| ||||| |||| | | ||| | | | Sbjct 78206 TCTCGTGACGAGGGTCTTCACACTGACTTTGCTTGCCTCCTCTTCTC---TCACCTCCGC 78150 Query 26056 CACAAACCTTCTCAAGAGACCGTCTACAG-TATCATCAAAGAGGCTGTGGAGATCGAGAA 26114 ||| || | ||| | || | ||| ||||||| || || ||||| |||||| | Sbjct 78149 CACCGTCCCAGCCCAGAAGCTGT-TGCAGCAATCATCATTGAAGCCGTGGAAATCGAGCA 78091 Query 26115 GGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAG 26174 || || | ||||||||| || | ||| | Sbjct 78090 AGAATTCTTAACGGATGCTCTTCCATGTGCTCTCCTTGGCATGAACTCCAAGTTGATGTG 78031 Query 26175 CCAATACATTGAGTATGTGGCCGACCATCTGC-TGTGCCAGCTGGGACTCGCCAGACTCT 26233 ||||||||| |||| || ||||||| | | ||| | || || | | || | Sbjct 78030 CCAATACATCGAGTTCGTAGCCGACCGGTTACTTGTAGC-TCTTGGCAACAAGAAACATT 77972 Query 26234 ACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACT 26293 | | | | ||||| |||||||| ||||| ||||| ||| | | || |||||||||| Sbjct 77971 ATAACTCCACGAACCCATTCGACTTCATGGATAACATCTCGCTTGCCGGCAAGACCAACT 77912 Query 26294 TCTTTGAAAAGAGGGTCGGCGACTATCAA 26322 | ||||| ||| | || ||||| || ||| Sbjct 77911 TTTTTGAGAAGCGTGTTGGCGATTACCAA 77883 >seq7 Length=1353353 Score = 84.2 bits (92), Expect = 4e-11 Identities = 124/172 (72%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 222032 ACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGG-TC-CGCT 222089 |||| | |||||| | ||| || |||| || || | || ||||||| || || | || Sbjct 416122 ACCCGTTTCATGAACAAGTCGGGAGTCCAGAGGGCGAGGAAAAGATCTCGGGCTCTCACT 416063 Query 222090 GCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACG 222149 || || || | | ||||| | || |||||||||||||| | ||||| |||||| | Sbjct 416062 TCTTCTTTAC--CATGATTTTTACGGAGGTCCAAAAACTCAAATACGTCAGAGTGCCAAG 416005 Query 222150 GCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201 | || ||||| | || | ||| || || || || ||||| ||||||||||| Sbjct 416004 GTTCAAGATAAATAGCAAAAGCACCAGGGCGTTTATTGCCGCCCTGATCCAC 415953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844347188160