Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq8 131 1e-24
seq5 91.5 1e-12
seq1 89.7 3e-12
seq9 86.0 4e-11
>seq8
Length=1298916
Score = 131 bits (144), Expect = 1e-24
Identities = 528/823 (64%), Gaps = 13/823 (2%)
Strand=Plus/Plus
Query 475367 ACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCATGGT 475424
|| ||||| || | || | |||||||||||||| || || | ||||| | || |
Sbjct 234040 ACTGCTGGTGACACGCACTTGGGTGGTGAAGATTTCGACAACCGTCTTGTCAACCAC--T 234097
Query 475425 GTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATCTGCTAAAGCATTAA 475484
||| | || |||||| | || | || ||||| || | |||| || |
Sbjct 234098 TTGTCAACGAATTCAAGCGTAAGCACAAGAAGGATCTGTCCTCCAATGCTCGCGCCCTTC 234157
Query 475485 GACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTA 475544
| || || | |||||||| |||||||| ||||| |||| || |||||| | || |||
Sbjct 234158 GCCGCCTCCGCACTGCTTGCGAACGTGCCAAGCGCACTCTCTCGTCTGCTGCCCAGACTT 234217
Query 475545 CTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTA 475604
|| ||||| | || ||||| | || || |||| | | ||| || || | ||
Sbjct 234218 CTATTGAAATCGACTCTCTCTACGAGGGTGTTGACTTCTACACTTCCATCACTCGTGCCC 234277
Query 475605 AATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTC 475664
|| || || |||| |||||||| | || || || || ||||| | || |
Sbjct 234278 GTTTCGAGGAACTTTGCCAGGATCTCTTCCGTTCCACCATGGAGCCTGTTGAGCGTGTCC 234337
Query 475665 TCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAA 475724
|| | || ||||| | || ||||| ||||| ||||| || | || || ||||| |
Sbjct 234338 TCCGTGACGCTAAAATCGATAAATCTTCCGTCCACGAAATCGTCTTGGTCGGTGGTTCTA 234397
Query 475725 CAAGAATTCCAAAAATAAGAGAA-ATGCTTTCATCATATTTTAATGGTAAAAAGTTAAAT 475783
| | || || || || |||| ||| | || | || ||||| || || ||
Sbjct 234398 CCCGTATCCCCAAGATCC-AGAAGATGGTCTCCGACTTCTTCAATGGCAAGGAGCCCAAC 234456
Query 475784 GAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTT 475841
|||| || || ||||| || || ||||| || || ||||||||||| || ||||| |
Sbjct 234457 --AAGTCTATCAACCCTGACGAGGCCGTTGCCTACGGTGCTGCTGTCCAGGCTGCTATCT 234514
Query 475842 TATCAGGTCAATCAGACGAGAA-ACTA--AATAATATTGTACTTGTTGACGTAACTCCAC 475898
| || || | | | || ||| || | || | ||| | ||||| | || |
Sbjct 234515 TGTCTGGCGATACTTCCTCCAAGTCTACCAACGAAATCTTGCTTCTCGACGTTGCCCCTC 234574
Query 475899 TTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTC 475958
|||| || || | || || | ||| || | ||||| ||| || | | || ||
Sbjct 234575 TTTCCTTGGGCATCGAGACTGCTGGTGGCGTCATGACCCCTCTCATCAAGCGCAACACCA 234634
Query 475959 CTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAA 476018
|||||||| ||| || || | || || |||| || || || || | |||
Sbjct 234635 CTATCCCAACCAAGAAGTCCGAGACTTTCTCTACTTTCTCCGACAACCAGCCTGGTGTCT 234694
Query 476019 CCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTT 476078
||||| ||| ||||||||| | ||| || || || ||| || || | |
Sbjct 234695 TGATCCAGGTCTACGAAGGTGAACGTGCTCGCACCAAGGACAACAACTTGCTCGGTAAAT 234754
Query 476079 TTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTG 476138
| | ||| || ||||||||||||||| | || |||||||| || ||||| ||||| |
Sbjct 234755 TCGAACTTACTGGCATTCCTCCTGCTCCCCGTGGTGTTCCTCAGATCGAAGTCACTTTCG 234814
Query 476139 ATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAA 476181
|| |||| || |||||||| | || || ||||| ||| ||
Sbjct 234815 ATGTTGACGCCAATGGTATCATGAACGTCTCTGCTCTTGAGAA 234857
>seq5
Length=1732373
Score = 91.5 bits (100), Expect = 1e-12
Identities = 127/173 (73%), Gaps = 4/173 (2%)
Strand=Plus/Plus
Query 480593 ATTATAATCAGCT-AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTT 480651
||||||||| ||| | ||| | ||| ||||| |||||||| || ||||| | || |
Sbjct 840102 ATTATAATC-GCTCAAAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAAATCAATCGCT 840160
Query 480652 GTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTAT 480711
|||| || || ||||| || |||||||| |||||||| |||||| ||||| ||||
Sbjct 840161 GTTGGTCTGGCGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTATCAATTGTAT 840220
Query 480712 CAGT-GTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAA 480763
| | | | | | |||| || || || || |||||||| |||||||||||
Sbjct 840221 CGCTCGACTCGACCT-CAAGAGTGATGGTCTTGCCGGTGAGGGTCTTAACGAA 840272
>seq1
Length=3145143
Score = 89.7 bits (98), Expect = 3e-12
Identities = 99/132 (75%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803
||||||| || || || || |||||| ||| | ||||| || || ||||| |||| |
Sbjct 1047896 TTACTGTCCCTGCCTACTTCAATGATAACCAAAGACAAGCCACCAAGGATGCCGGAACTA 1047955
Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863
|||| ||| | ||||| | ||| || | ||||| || || || ||||| |||| || |
Sbjct 1047956 TTGCCGGTTTGAATGTCCTTCGTGTTGTCAATGAGCCTACCGCCGCCGCTATTGCCTACG 1048015
Query 474864 GTCTTGATAAGA 474875
||||||||||||
Sbjct 1048016 GTCTTGATAAGA 1048027
>seq9
Length=1275601
Score = 86.0 bits (94), Expect = 4e-11
Identities = 113/154 (73%), Gaps = 2/154 (1%)
Strand=Plus/Minus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||||||||||||||| || ||||| || || || ||||| || || ||||| ||||||||
Sbjct 1015801 ATCTTCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGAATACCTTCCTT 1015742
Query 480677 GTCTTGAATCTTTTGT-TTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAA 480735
|| ||||| |||||| |||||| ||||| || || | | | ||| | || |
Sbjct 1015741 ATCCTGAAT-TTTTGTCTTGACATTGTCAATCGTGTCCGAAGATTCAACTTCTAATGTGA 1015683
Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || || ||||| || || || || ||||| ||
Sbjct 1015682 TGGTCTTGCCGGTAAGTGTTTTGACAAAAATCTG 1015649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268177527100772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |