Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq6 150 2e-31 >seq6 Length=1499889 Score = 150 bits (166), Expect = 2e-31 Identities = 288/420 (69%), Gaps = 7/420 (2%) Strand=Plus/Minus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 |||||| ||||||| || || || ||||| || || || || ||||||||||| || Sbjct 688443 AATGGTCGAAGATGTTCCGCGACGCCGATAGGTCCAACTCCTGGGCCTCCACCTCCGTGA 688384 Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGT 138281 ||||||||||| |||||||| | || || || || || || || ||| |||| ||| Sbjct 688383 GGAATACAGAAAGTCTTATGGAGGTTAAGGTGGCACACGTCGGCTCCAATTTCACCTGGA 688324 Query 138282 TTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTG 138341 || || | ||||||||| | || |||||||| | ||| ||||| |||||| Sbjct 688323 GAGCAGAGGCCAATCTGTGCATTCATGTTGGCACCATCCATATACACCTGGCCACCAAAT 688264 Query 138342 TCATGAACGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGA 138401 || |||||||| | ||| | | |||| | | ||| | |||||| || ||| Sbjct 688263 TCGTGAACGATGTCACAAACTTCCTTGATAGTGGGCTCATAGACACCAAAGGTGCTAGGA 688204 Query 138402 TATGTAATCATAATACATGAGAGTTCAAATGTA--TTCATGATTGCTTTCTTCTCTAGAT 138459 || |||||||| || | |||||| | || || ||| |||| || |||| Sbjct 688203 TAAGTAATCATGATGGCTCCTAGTTCATCTTTATGTTTCTGA-CACTTTGCTC-GAAGAT 688146 Query 138460 CTTTGATGTCTATGTTGCCATCATCA---TCACACTTGACACCTACAACTTTCATTCCTG 138516 || ||| ||| | || ||| | || |||||||| || ||||| |||||||| | Sbjct 688145 CTGTGACGTCAAGATTTCCAGTAGCAGTGTCACACTTCACTGGAACAACCTTCATTCCCG 688086 Query 138517 CCATGACTGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTC 138576 ||||| | ||||| || || || ||||| ||||| || | || |||| || | ||||| Sbjct 688085 CCATGGCAGCACTGGCGGGGTTCGTTCCGTGTGCAGAGACGGGAATCAAGCAGATATTTC 688026 Score = 120 bits (132), Expect = 4e-22 Identities = 188/269 (70%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331 |||||||| ||||||| | ||| |||||| || ||||||||||| || ||||| || Sbjct 687282 CCATGATACACTGCATACATGGCAGTCATATTAGCCAGCAGTGCTTGAGCAGTGCAAATA 687223 Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391 || ||||| ||||| |||| || ||||||||| || | ||| || || || | | | Sbjct 687222 TTGCTGGTGGCTTTTTCTCGTCGAATATGCTGTTCACGAGTCTGGAGCGCAAGCCGCAAG 687163 Query 139392 GCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTA 139451 ||| | || || | ||| ||| ||| || || | ||| || || || | ||| Sbjct 687162 GCACGGTTTCCGAGACGGTCTTTTGAAACACCAACGATACGGCCTGGGATTTTACGTTTA 687103 Query 139452 TACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCA 139511 |||||||| || || ||||| |||||||| || || || | ||||| || | ||| Sbjct 687102 TACTTGTCGGTACAGGCGAAGAAAGCAGCATGGGGGCCGCCAAAACCCATGGGCACACCG 687043 Query 139512 AACCTTTGCATACTACCTACAGCAATATC 139540 | |||||| | | || | |||||||| Sbjct 687042 AGTCTTTGCGCATTTCCAAAGGCAATATC 687014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998117738280