Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq6 150 2e-31
>seq6
Length=1499889
Score = 150 bits (166), Expect = 2e-31
Identities = 288/420 (69%), Gaps = 7/420 (2%)
Strand=Plus/Minus
Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221
|||||| ||||||| || || || ||||| || || || || ||||||||||| ||
Sbjct 688443 AATGGTCGAAGATGTTCCGCGACGCCGATAGGTCCAACTCCTGGGCCTCCACCTCCGTGA 688384
Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGT 138281
||||||||||| |||||||| | || || || || || || || ||| |||| |||
Sbjct 688383 GGAATACAGAAAGTCTTATGGAGGTTAAGGTGGCACACGTCGGCTCCAATTTCACCTGGA 688324
Query 138282 TTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTG 138341
|| || | ||||||||| | || |||||||| | ||| ||||| ||||||
Sbjct 688323 GAGCAGAGGCCAATCTGTGCATTCATGTTGGCACCATCCATATACACCTGGCCACCAAAT 688264
Query 138342 TCATGAACGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGA 138401
|| |||||||| | ||| | | |||| | | ||| | |||||| || |||
Sbjct 688263 TCGTGAACGATGTCACAAACTTCCTTGATAGTGGGCTCATAGACACCAAAGGTGCTAGGA 688204
Query 138402 TATGTAATCATAATACATGAGAGTTCAAATGTA--TTCATGATTGCTTTCTTCTCTAGAT 138459
|| |||||||| || | |||||| | || || ||| |||| || ||||
Sbjct 688203 TAAGTAATCATGATGGCTCCTAGTTCATCTTTATGTTTCTGA-CACTTTGCTC-GAAGAT 688146
Query 138460 CTTTGATGTCTATGTTGCCATCATCA---TCACACTTGACACCTACAACTTTCATTCCTG 138516
|| ||| ||| | || ||| | || |||||||| || ||||| |||||||| |
Sbjct 688145 CTGTGACGTCAAGATTTCCAGTAGCAGTGTCACACTTCACTGGAACAACCTTCATTCCCG 688086
Query 138517 CCATGACTGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTC 138576
||||| | ||||| || || || ||||| ||||| || | || |||| || | |||||
Sbjct 688085 CCATGGCAGCACTGGCGGGGTTCGTTCCGTGTGCAGAGACGGGAATCAAGCAGATATTTC 688026
Score = 120 bits (132), Expect = 4e-22
Identities = 188/269 (70%), Gaps = 0/269 (0%)
Strand=Plus/Minus
Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331
|||||||| ||||||| | ||| |||||| || ||||||||||| || ||||| ||
Sbjct 687282 CCATGATACACTGCATACATGGCAGTCATATTAGCCAGCAGTGCTTGAGCAGTGCAAATA 687223
Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391
|| ||||| ||||| |||| || ||||||||| || | ||| || || || | | |
Sbjct 687222 TTGCTGGTGGCTTTTTCTCGTCGAATATGCTGTTCACGAGTCTGGAGCGCAAGCCGCAAG 687163
Query 139392 GCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTA 139451
||| | || || | ||| ||| ||| || || | ||| || || || | |||
Sbjct 687162 GCACGGTTTCCGAGACGGTCTTTTGAAACACCAACGATACGGCCTGGGATTTTACGTTTA 687103
Query 139452 TACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCA 139511
|||||||| || || ||||| |||||||| || || || | ||||| || | |||
Sbjct 687102 TACTTGTCGGTACAGGCGAAGAAAGCAGCATGGGGGCCGCCAAAACCCATGGGCACACCG 687043
Query 139512 AACCTTTGCATACTACCTACAGCAATATC 139540
| |||||| | | || | ||||||||
Sbjct 687042 AGTCTTTGCGCATTTCCAAAGGCAATATC 687014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578998117738280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |