Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq7 129 7e-25 seq6 120 4e-22 >seq7 Length=1353353 Score = 129 bits (142), Expect = 7e-25 Identities = 678/1072 (63%), Gaps = 34/1072 (3%) Strand=Plus/Plus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | ||||| | || | || || |||||||||| || | ||||||||||||||| Sbjct 416316 TGGTACGCTATCTTGGAAGCTCAAACCGAGACTGGAAATCCTTTCATGCTTTACAAGGAT 416375 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 || ||||| |||||| ||||| ||||| | ||||| || | || || ||| | || Sbjct 416376 GCCTGTAATCGGAAGAGCAACCAGAAGAACCTTGGAACTATTAGAAGTTCTAATTTATGT 416435 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057 ||||||||| | ||||| || | ||||| || || |||||| | |||||| | Sbjct 416436 ACGGAAATTATTGAGTATACTGCCCCCGATGAAGTCGCCGTGTGCAATCTAGCATCACTT 416495 Query 76058 GCCCTTCCAAAGTATGTCAATGAAGAGACTC---GCACTTTTGATTATGAAAAACTTCAT 76114 || | |||| || || ||| | | | || | || | || ||| | || Sbjct 416496 GCTTTGCCAACATACGT---TGACGCTATCCGCGGCGAGTACGACTTTGGTAAATTGCAC 416552 Query 76115 GAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCC 76174 | | |||| | |||| ||| ||||| ||||||| | || || ||| Sbjct 416553 GCAGTCACCCAAGTTGTGGTGCGCAATTTAAACAAGATCATTGATAACAACCACTACCCC 416612 Query 76175 GTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGT 76234 ||| || |||||| ||| | || || | || |||| | | || |||||||| Sbjct 416613 GTTCCCGAAGCTCGAAAGAGTAACTTCCGTCATCGCCCAATTGCTCTTGGGGTTCAAGGA 416672 Query 76235 CTCGCGGATGTATTTATTTTGTGCCGCTACG-----CATTTGATTCAGATGAAGCCAAGG 76289 ||||| |||| || || | ||||| | ||||| || | | || ||| Sbjct 416673 CTCGCTGATG-----CCTTCTTGGCTCTACGTTTGCCTTTTGACTCCTCTCAGGCTAAGC 416727 Query 76290 AGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAAT 76349 || ||||| || |||||||| || || || || || ||||| || || ||| Sbjct 416728 AGCTGAATATTCAGATCTTTGAGACAATTTACCATGCCGCCCTGACTGCATCCTGCGAAC 416787 Query 76350 TGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGC 76409 | | | || |||| | || || |||| ||| |||||||| | || || || | Sbjct 416788 TTTCAAAGACCGAAGGCCCATACGAAACATATGAAGGTTCTCCTGTTTCTCAGGGAATTT 416847 Query 76410 TTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACGACTGGGATGTTCTCAA 76467 | |||| |||||||| |||| || | ||| || | | | || |||| | ||| || Sbjct 416848 TGCAGTATGATATGT-GGAACGTAACACC-TTCTGACCTTTGGGATTGGGTTTCTCTTAA 416905 Query 76468 GGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACA 76525 | || || ||| | | ||| | || ||||||||| | | || || ||||| || Sbjct 416906 GAAAGAAATAGCAA--AACACGGTGTACGCAACAGTCTTCTTGTTGCCCCTATGCCCACT 416963 Query 76526 GCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATC 76585 || ||| |||||| | || || ||||||||||| |||||||| |||| ||| Sbjct 416964 GCTAGTACCAGCCAAATCCTTGGCTTCAACGAATGCTTTGAGCCATACACCTCAAATATC 417023 Query 76586 TACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGAC 76645 || | || ||| ||||| || || |||| ||| || | || || Sbjct 417024 TATTCTCGGCGAGTCCTTGCAGGAGAATTCCAAGTTGTTAACCCATGGCTTCTGAAAGAT 417083 Query 76646 CTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGT 76705 || | |||| || ||||| | | ||||| ||| ||| | | ||||| Sbjct 417084 CTTGTTGACCTTGGACTTTGGTCTGACAACATGAAAAATCGCATCATCGCTGATGGTGGC 417143 Query 76706 TCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGG 76765 || ||||||||||| | ||||||| ||||| ||||| || ||| || || ||| Sbjct 417144 TCAATTCAAAATATTCCCAATATCCCCGATGACATCAAAGCCCTTTACAAGACTGTATGG 417203 Query 76766 GAAAT---CAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGAT 76822 ||||| || || | | || | ||||| |||||||||||| ||||| ||| Sbjct 417204 GAAATTTCTCAGCGGA---CTATTGTTCAGATGGCTGCAGATCGTGGTGCTTTCATCGAT 417260 Query 76823 CAAAGTCAAAGTATGAATCTATTCATGGAAAG--TCCAACGATGTCCAAGCTCTCTTCTA 76880 ||| ||| | || ||||||| ||| || || ||| ||| | || | Sbjct 417261 CAATCCCAATCCCTCAA--TATTCATCTTAAGGAGCCCACAATGGGCAAAATTACTAGCA 417318 Query 76881 TGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 ||||| | | |||||| || | |||||||| ||||||||||| || Sbjct 417319 TGCATTTTGCTGGCTGGAAATTAGGTTTGAAAACCGGCATGTACTATCTTCG 417370 Score = 109 bits (120), Expect = 7e-19 Identities = 417/652 (64%), Gaps = 7/652 (1%) Strand=Plus/Plus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205 |||||||| |||| || || |||| | ||||| | | | || | |||| | Sbjct 415530 TACTTTGGGTTCAAGACACTGGAGAGGTCGTATCTACTAAGAATCAACGGCAAAGTTGCT 415589 Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 ||| || ||| | ||| | ||||| || || | || || || || ||||||||| Sbjct 415590 GAACGTCCGCAGCATATGATTATGCGCGTTGCCGTTGGTATTCATCATGAGGACATTGAT 415649 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACC 75325 | | ||||||||| || |||||||||| | || | ||||| | || || Sbjct 415650 AAAGCGATTGAGACATACCACCTGATGTCCCAAAAATTTTTTACCCACGCTTCTCCCACA 415709 Query 75326 CTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAG 75385 || |||||||| || ||||| ||| |||||| | ||||||||||| | | ||| Sbjct 415710 CTTTTCAATGCGGGAACACCTCAACCACAGATGGCTTCCTGCTTCCTTATTGATATGAAG 415769 Query 75386 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 75445 ||||| || | || ||||||| || || | | ||||| | || || ||| Sbjct 415770 GAGGATAGTATTGAGGGGATCTATGATACACTGAAGACATGTGCTCTGATTTCCAAGACT 415829 Query 75446 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 |||||||||||||| | || | || | | || | | || ||| || Sbjct 415830 GCTGGGGGTATTGGACTCAACGTTCACCGAATCCGTGCAACTGGCTCCTACATTGCAGGA 415889 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 |||||||| || |||| || ||||| |||||||| || |||||| || || | Sbjct 415890 ACAAATGGCTCCTCTAATGGGATCATTCCCATGCTTCGTGTCTTTAACAATACTGCCAGA 415949 Query 75566 TATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 ||||| |||| | || | ||| || | | || | || | ||||| ||| Sbjct 415950 TATGTGGATCAGGGCGGCAATAAACGCCCTGGTGCTTTTGCTATTTATCTTGAACCTTGG 416009 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || | || | | ||||| | || | || || || ||| | ||||| | | Sbjct 416010 CACTCTGACGTATTTGAGTTTTTGGACCTCCGTAAAAATCATGGTAAAGAAGAAGTGAGA 416069 Query 75683 TGTAGAGATCTCTTTTCAT--CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG 75740 |||| ||||||| | |||| |||| ||| ||| | |||||||| ||||||||| Sbjct 416070 GCCCGAGA--TCTTTTCCTCGCCCTCTGGACTCCCGACTTGTTCATGAAACGGGTTGAGA 416127 Query 75741 AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGA 75792 || ||| | ||| | || ||||||||| || ||||| | || ||| |||| Sbjct 416128 AGAATGGCGATTGGACACTATTCTGTCCAAACGAGGCATCTGGACTCGCCGA 416179 >seq6 Length=1499889 Score = 120 bits (132), Expect = 4e-22 Identities = 295/445 (66%), Gaps = 12/445 (3%) Strand=Plus/Minus Query 65078 AGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CT 65136 |||| ||| |||| || || ||| ||||||||||||||| || || || ||| || Sbjct 78325 AGCGTCTTATTGCTTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGTTCTTT-TGCTTCT 78267 Query 65137 ATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATT 65196 |||| ||||| |||||||| ||||||||||| ||||| ||||| || || || || Sbjct 78266 ATTTTCTGGTTAAAGAAGCGTGGTCTCATGCCTGGCCTTACTTTCTCCAACGAGCTGATC 78207 Query 65197 TCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAAT 65256 || || || |||||||| ||| || ||||| |||||| | || | Sbjct 78206 TCTCGTGACGAGGGTCTTCACACTGACTTTGCTTGCCTCCTCTTCTCTCACCTCCGCCAC 78147 Query 65257 AGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGG 65316 | |||| | ||| || | || ||| | | || || || || || ||| ||| Sbjct 78146 CGTCCCAGCCCAGAAGCTGTTGCAGCAATCATCATTGAAGCCGTGGAAATCGAGCAAGAA 78087 Query 65317 TTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAG 65376 ||| | ||| || || |||||| |||| | || |||||||| || ||||| | | Sbjct 78086 TTCTTAACGGATGCTCTTCCATGTGCTCTCCTTGGCATGAACTCCAAGTTGATGTGCCAA 78027 Query 65377 TACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCA-----TTT 65431 ||||| |||| || | || || | || | |||| || | | || Sbjct 78026 TACATCGAGTTCGTAGCCGACCGGTTACTTGTAGCTCTTGG-----CAACAAGAAACATT 77972 Query 65432 GGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACT 65491 ||| | | ||| ||||| ||||| ||||| ||||| |||| || |||||||||| Sbjct 77971 ATAACTCCACGAACCCATTCGACTTCATGGATAACATCTCGCTTGCCGGCAAGACCAACT 77912 Query 65492 TCTTTGAGAAGCGAGTTGGGGACTA 65516 | ||||||||||| ||||| || || Sbjct 77911 TTTTTGAGAAGCGTGTTGGCGATTA 77887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569309172320