Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq9 105 1e-17 >seq9 Length=1275601 Score = 105 bits (116), Expect = 1e-17 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | ||||| || || |||||||| || ||||||||||| || |||| Sbjct 1015418 ATGCAAATTTTCGTAAAAACCTTAACCGGAAAAACAATCACATTAGAAGTTGAGTCTTCT 1015477 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || ||||| |||| || || |||||||||||||| || || ||||| || Sbjct 1015478 GATACGATCGACAACGTCAAAACAAAGATTCAAGATAAAGAAGGTATCCCACCAGACCAG 1015537 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | || | |||||||| || ||||| || | | || | || ||||| | Sbjct 1015538 CAACGCCTAATCTTCGCCGGTAAACAACTCGAGGACGGCCGCACACTGTCTGATTACA-- 1015595 Query 156003 ATATCCAAAGAG 156014 | ||||||| || Sbjct 1015596 ACATCCAAAAAG 1015607 Score = 96.9 bits (106), Expect = 5e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | |||||| | || || || || || ||||||||||| ||| ||| Sbjct 1015646 ATGCAGATTTTTGTCAAAACACTTACCGGCAAGACCATCACATTAGAAGTTGAATCTTCG 1015705 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || || | ||||| || ||||| ||||| || || || || ||| Sbjct 1015706 GACACGATTGACAATGTCAAGACAAAAATTCAGGATAAGGAAGGTATTCCACCCGACCAA 1015765 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | | || | |||||| ||||| || |||||| | | || | ||||| || ||| Sbjct 1015766 CAGCGCCTCATCTTTGCCGGCAAGCAACTTGAAGATGGCCGTACGCTTTCAGACTACAAT 1015825 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATT 156040 || |||||| || || || || || || ||||| Sbjct 1015826 ATCCAGAAAGAGAGCACTCTGCACTTGGTTTTGAGATT 1015863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871643212400