Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq9 109 1e-18 >seq9 Length=1275601 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | | || || || | || | |||| |||||| || || ||||| Sbjct 1015647 ATACCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCA 1015588 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| || | ||||||||| || || |||| | || ||||| ||| Sbjct 1015587 GACAGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGT 1015528 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||||||||| || || |||| || || || ||||| || || || Sbjct 1015527 GGGATACCTTCTTTATCTTGAATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCA 1015468 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| || || ||||| || ||||| ||||| | ||| || ||||| Sbjct 1015467 ACTTCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418 Score = 87.8 bits (96), Expect = 3e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || | || | ||| | ||| || ||| || ||||| Sbjct 1015419 ATACCACCGCGAAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAATCC 1015360 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || || | |||||||||||| || || |||| || ||||| || Sbjct 1015359 GAGAGGGTGCGACCATCCTCGAGTTGTTTACCAGCGAAGATCAATCGTTGCTGGTCGGGG 1015300 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| || || || || |||| ||||| || ||||| || || || Sbjct 1015299 GGGATGCCTTCTTTGTCCTGGATCTTGGTTTTCACATTGTCGATGGTATCAGAAGACTCG 1015240 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGT 172045 || || || ||||| || || ||||| Sbjct 1015239 ACCTCAAGGGTAATAGTCTTGCCAGT 1015214 Score = 84.2 bits (92), Expect = 4e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 ||||||||||| ||||| || | |||||||| || || || || || || ||||| || Sbjct 1015048 TGTTTACCAGCGAAAATCAAGCGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCTTGGATC 1014989 Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043 ||| | || |||||| || ||||| || || || || || || ||||| || ||| Sbjct 1014988 TTAGTCTTAACATTATCAATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCA 1014929 Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069 || | || || | ||| |||||||| Sbjct 1014928 GTCAGGGTCTTGACGAAGATCTGCAT 1014903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135558746200