Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq4 111 2e-18 seq6 93.3 5e-13 >seq4 Length=1783884 Score = 111 bits (122), Expect = 2e-18 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||||||||||| ||| ||||| | ||| | || |||||| |||| |||||| Sbjct 1766075 GCTGCAAACTACCTCGACATTAAGGCTCTGTTGGATGTCGGCTGCAAGACTGTTGCCAAC 1766134 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 |||||||| || ||||| ||||| || ||||||||||| || || ||| || Sbjct 1766135 ATGATCAAAGGAAAGTCTCCCGACGAAATCCGCAAGACTTTCAATATCCAG 1766185 >seq6 Length=1499889 Score = 93.3 bits (102), Expect = 5e-13 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||| ||||| || ||| ||| ||||||||||||||||| | |||||||| ||||| Sbjct 77886 GTAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGCAAGCGAGATGTTATCCAT 77945 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818 | ||| ||||| | | || || || || | | || || | | || | || Sbjct 77946 GAAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTGCCAAGAGCTACAAGTAACCG 78005 Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878 |||||| || ||||||||||| |||||||| | || ||||||||| | ||| || Sbjct 78006 GTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTTCATGCCAAGGAGAGCACA 78065 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGAT 868932 || || | || | | || |||| |||||| || ||||| || | |||||| Sbjct 78066 TGGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCACGGCTTCAATGATGAT 78119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107135999477363