Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq4 111 2e-18
seq6 93.3 5e-13
>seq4
Length=1783884
Score = 111 bits (122), Expect = 2e-18
Identities = 91/111 (82%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| || |||||||||||||| ||| ||||| | ||| | || |||||| |||| ||||||
Sbjct 1766075 GCTGCAAACTACCTCGACATTAAGGCTCTGTTGGATGTCGGCTGCAAGACTGTTGCCAAC 1766134
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296
|||||||| || ||||| ||||| || ||||||||||| || || ||| ||
Sbjct 1766135 ATGATCAAAGGAAAGTCTCCCGACGAAATCCGCAAGACTTTCAATATCCAG 1766185
>seq6
Length=1499889
Score = 93.3 bits (102), Expect = 5e-13
Identities = 161/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758
||| ||||| || ||| ||| ||||||||||||||||| | |||||||| |||||
Sbjct 77886 GTAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGCAAGCGAGATGTTATCCAT 77945
Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818
| ||| ||||| | | || || || || | | || || | | || | ||
Sbjct 77946 GAAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTGCCAAGAGCTACAAGTAACCG 78005
Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878
|||||| || ||||||||||| |||||||| | || ||||||||| | ||| ||
Sbjct 78006 GTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTTCATGCCAAGGAGAGCACA 78065
Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGAT 868932
|| || | || | | || |||| |||||| || ||||| || | ||||||
Sbjct 78066 TGGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCACGGCTTCAATGATGAT 78119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107135999477363
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |