Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq9 104 2e-17 seq6 87.8 2e-12 >seq9 Length=1275601 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || || || || |||||||| || || || || | | || || | || | Sbjct 1015205 AAGACTCTTACTGGCAAGACTATTACCCTTGAGGTCGAGTCTTCTGATACCATCGACAAT 1015264 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || ||| |||||||| ||||||||||| || || ||||| || ||||| |||||||| Sbjct 1015265 GTGAAAACCAAGATCCAGGACAAAGAAGGCATCCCCCCCGACCAGCAACGATTGATCTTC 1015324 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 || || ||||| || |||||| | | | | || ||||| |||||||| ||||| || Sbjct 1015325 GCTGGTAAACAACTCGAGGATGGTCGCACCCTCTCGGATTACAACATTCAGAAGGAGTCC 1015384 Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||| | || | || | ||||| || Sbjct 1015385 ACTCTCCACCTTGTCCTTCGTCTTCGCGGTGG 1015416 Score = 102 bits (112), Expect = 7e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || || ||| | Sbjct 1014903 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGTCCAGC 1014962 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || || | ||| || |||||||||||||| || || || ||||| || || Sbjct 1014963 GATACCATTGATAATGTTAAGAC-TAAGATCCAAGACAAGGAGGGCATCCCTCCAGACCA 1015021 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||| ||||| || || || |||||||| || ||| | | | | || || || || Sbjct 1015022 ACAACGCTTGATTTTCGCTGGTAAACAGCTTGAAGATGGCCGCACCCTCTCCGACTACAA 1015081 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || |||||||| Sbjct 1015082 CATCCAGAAGGAGAGTACCCTCCACTTGGT 1015111 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || ||||| || || || || | ||||| ||| | | Sbjct 1015646 ATGCAGATTTTTGTCAAAACACTTACCGGCAAGACCATCACATTAGAAGTTGAATCTTCG 1015705 Query 24764 GACACAGTAGAAACGGTAAA-ACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||| || || || || ||||| || || ||||| || Sbjct 1015706 GACACGATTGACAATGTCAAGACAAAA-ATTCAGGATAAGGAAGGTATTCCACCCGACCA 1015764 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| || | ||||||||||| || || || || ||| | | | ||||| || || Sbjct 1015765 ACAGCGCCTCATCTTTGCCGGCAAGCAACTTGAAGATGGCCGTACGCTTTCAGACTACAA 1015824 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || || || || |||||||| ||| ||||||| ||||| Sbjct 1015825 TATCCAGAAAGAGAGCACTCTGCACTTGGTTTTGAGATTGCGTGGAGG 1015872 >seq6 Length=1499889 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 126242 TCATCGAAGCTGTCAACATTGAAAAGGAATTCTTTACGTCGGCGCTGCCATGCGATATGT 126301 |||| ||||| || | || || | |||||||| ||| || || ||||| | | | Sbjct 78115 TCATTGAAGCCGTGGAAATCGAGCAAGAATTCTTAACGGATGCTCTTCCATGTGCTCTCC 78056 Query 126302 TGGGAATGAATTCTACAGCGATGTGCGAATATATAGAGTTCGTAGCGGACCGTTTGCTCG 126361 | || ||||| || | ||||||| |||| || ||||||||||| ||||| || || | Sbjct 78055 TTGGCATGAACTCCAAGTTGATGTGCCAATACATCGAGTTCGTAGCCGACCGGTTACTTG 77996 Query 126362 TCGAATTACGACAAC-CGAAACACTTTAATACACCCAATCCATTTAACTTTATGAACAAT 126420 | | | | |||| |||||| | ||| | | || ||||| |||| ||| | || Sbjct 77995 TAG-CTCTTGGCAACAAGAAACATTATAACTCCACGAACCCATTCGACTTCATGGATAAC 77937 Query 126421 ATTTCTCTCGAGGGAAAGACTAACTTTTTCGAGAGACGTGTCGGAGAGTA 126470 || || || | || ||||| |||||||| |||| ||||| || || || Sbjct 77936 ATCTCGCTTGCCGGCAAGACCAACTTTTTTGAGAAGCGTGTTGGCGATTA 77887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897380674920