Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq9 104 2e-17
seq6 87.8 2e-12
>seq9
Length=1275601
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778
|| || || || || || |||||||| || || || || | | || || | || |
Sbjct 1015205 AAGACTCTTACTGGCAAGACTATTACCCTTGAGGTCGAGTCTTCTGATACCATCGACAAT 1015264
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| ||| |||||||| ||||||||||| || || ||||| || ||||| ||||||||
Sbjct 1015265 GTGAAAACCAAGATCCAGGACAAAGAAGGCATCCCCCCCGACCAGCAACGATTGATCTTC 1015324
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
|| || ||||| || |||||| | | | | || ||||| |||||||| ||||| ||
Sbjct 1015325 GCTGGTAAACAACTCGAGGATGGTCGCACCCTCTCGGATTACAACATTCAGAAGGAGTCC 1015384
Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||| | || | || | ||||| ||
Sbjct 1015385 ACTCTCCACCTTGTCCTTCGTCTTCGCGGTGG 1015416
Score = 102 bits (112), Expect = 7e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || || || || || || || ||| |
Sbjct 1014903 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGTCCAGC 1014962
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || || | ||| || |||||||||||||| || || || ||||| || ||
Sbjct 1014963 GATACCATTGATAATGTTAAGAC-TAAGATCCAAGACAAGGAGGGCATCCCTCCAGACCA 1015021
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||||| ||||| || || || |||||||| || ||| | | | | || || || ||
Sbjct 1015022 ACAACGCTTGATTTTCGCTGGTAAACAGCTTGAAGATGGCCGCACCCTCTCCGACTACAA 1015081
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || ||||| || || ||||||||
Sbjct 1015082 CATCCAGAAGGAGAGTACCCTCCACTTGGT 1015111
Score = 102 bits (112), Expect = 7e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | ||||| || ||||| || || || || | ||||| ||| | |
Sbjct 1015646 ATGCAGATTTTTGTCAAAACACTTACCGGCAAGACCATCACATTAGAAGTTGAATCTTCG 1015705
Query 24764 GACACAGTAGAAACGGTAAA-ACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||| || || || || ||||| || || ||||| ||
Sbjct 1015706 GACACGATTGACAATGTCAAGACAAAA-ATTCAGGATAAGGAAGGTATTCCACCCGACCA 1015764
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| || | ||||||||||| || || || || ||| | | | ||||| || ||
Sbjct 1015765 ACAGCGCCTCATCTTTGCCGGCAAGCAACTTGAAGATGGCCGTACGCTTTCAGACTACAA 1015824
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || || || || || |||||||| ||| ||||||| |||||
Sbjct 1015825 TATCCAGAAAGAGAGCACTCTGCACTTGGTTTTGAGATTGCGTGGAGG 1015872
>seq6
Length=1499889
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 126242 TCATCGAAGCTGTCAACATTGAAAAGGAATTCTTTACGTCGGCGCTGCCATGCGATATGT 126301
|||| ||||| || | || || | |||||||| ||| || || ||||| | | |
Sbjct 78115 TCATTGAAGCCGTGGAAATCGAGCAAGAATTCTTAACGGATGCTCTTCCATGTGCTCTCC 78056
Query 126302 TGGGAATGAATTCTACAGCGATGTGCGAATATATAGAGTTCGTAGCGGACCGTTTGCTCG 126361
| || ||||| || | ||||||| |||| || ||||||||||| ||||| || || |
Sbjct 78055 TTGGCATGAACTCCAAGTTGATGTGCCAATACATCGAGTTCGTAGCCGACCGGTTACTTG 77996
Query 126362 TCGAATTACGACAAC-CGAAACACTTTAATACACCCAATCCATTTAACTTTATGAACAAT 126420
| | | | |||| |||||| | ||| | | || ||||| |||| ||| | ||
Sbjct 77995 TAG-CTCTTGGCAACAAGAAACATTATAACTCCACGAACCCATTCGACTTCATGGATAAC 77937
Query 126421 ATTTCTCTCGAGGGAAAGACTAACTTTTTCGAGAGACGTGTCGGAGAGTA 126470
|| || || | || ||||| |||||||| |||| ||||| || || ||
Sbjct 77936 ATCTCGCTTGCCGGCAAGACCAACTTTTTTGAGAAGCGTGTTGGCGATTA 77887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897380674920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |