Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 7e-13 seq6 91.5 2e-12 >seq4 Length=1783884 Score = 93.3 bits (102), Expect = 7e-13 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || || |||||||||||||| ||| | || | ||| | || |||||||| || |||||| Sbjct 1766075 GCTGCAAACTACCTCGACATTAAGGCTCTGTTGGATGTCGGCTGCAAGACTGTTGCCAAC 1766134 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | ||||| || ||||| ||||| || ||||||||||| || || ||| || Sbjct 1766135 ATGATCAAAGGAAAGTCTCCCGACGAAATCCGCAAGACTTTCAATATCCAG 1766185 >seq6 Length=1499889 Score = 91.5 bits (100), Expect = 2e-12 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || ||||| || ||| ||| ||||||||||||||||| | |||||||| ||||| Sbjct 77887 TAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGCAAGCGAGATGTTATCCATG 77946 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | ||| ||||| | | || || |||| | || || | |||| | ||| Sbjct 77947 AAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTGCCAAGAGCTACAAGTAACCGG 78006 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 ||||| ||||| || ||||| |||||||| | || ||||||||| | ||| || Sbjct 78007 TCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTTCATGCCAAGGAGAGCACAT 78066 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140 || || | || | | || |||| |||||| || ||||| || |||||||| Sbjct 78067 GGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCACGGCTTCAATGATGAT 78119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916242251392121