Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq9 123 2e-23 >seq9 Length=1275601 Score = 123 bits (136), Expect = 2e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | || || ||||| || || |||||||| ||||||| | ||||||| Sbjct 1015405 ACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGACC 1015346 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||||||||| ||||| | ||||||| |||||| || || || || || ||||| Sbjct 1015345 ATCCTCGAGTTGTTTACCAGCGAAGATCAATCGTTGCTGGTCGGGGGGGATGCCTTCTTT 1015286 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||| ||| | || | || |||||| || || ||||| || || Sbjct 1015285 GTCCTGGATCTTGGTTTTCACATTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTAAT 1015226 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAA 29776 ||| |||||||| | || || |||| Sbjct 1015225 AGTCTTGCCAGTAAGAGTCTTGACAA 1015200 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | ||| |||| || | || || || || |||||||| ||||| ||||| | Sbjct 1015644 CCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGAC 1015585 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| || ||||||||||| || || | || | | |||||| || || || Sbjct 1015584 AGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGG 1015525 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTT-GACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| ||||| ||||| ||| ||||||| ||| | || | || |||||| || || Sbjct 1015524 ATACCTTCTTTATCTTG-AATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAAC 1015466 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | || || ||||| || ||||||||||| || || || ||||| Sbjct 1015465 TTCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385219016900499