Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq8 140 2e-27
seq1 127 2e-23
seq3 102 6e-16
>seq8
Length=1298916
Score = 140 bits (154), Expect = 2e-27
Identities = 670/1048 (64%), Gaps = 18/1048 (2%)
Strand=Plus/Minus
Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500
||||||||||| || | ||| || |||||||| || ||||| || || | |||||||
Sbjct 234833 ATACCATTGGCGTCAACATCGAAAGTGACTTCGATCTGAGGAACACCACGGGGAGCAGGA 234774
Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560
|| || || | | ||| | || || || || || || ||| ||||||
Sbjct 234773 GGAATGCCAGTAAGTTCGAATTTACCGAGCAAGTTGTTGTCCTTGGTGCGAGCACGTTCA 234714
Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT- 281619
|| ||| | | ||||| || ||| || || || || |||| | || | |||
Sbjct 234713 CCTTCGTAGACCTGGATCAAGACACCAGGCTGGTTGTCGGAGAAAGTAGAGAA-AGTCTC 234655
Query 281620 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679
||| || || || || || ||||| | | || | | |||||| | ||||||||
Sbjct 234654 GGACTTCTTGGTTGGGATAGTGGTGTTGCGCTTGATGAGAGGGGTCATGACGCCACCAGC 234595
Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737
|| || | || | |||||||| | || || | || | || | || | || ||
Sbjct 234594 AGTCTCGATGCCCAAGGAAAGAGGGGCAACGTCGAGAAGCAAGATTTCGTTGGTAGACTT 234535
Query 281738 TCATCA-GTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 281795
| | || | ||| |||||| |||| || || | ||||||||| || ||||| || |
Sbjct 234534 GGAGGAAGTATCGCCAGACAAGA-TAGCAGCCTGGACAGCAGCACCGTAGGCAACGGCCT 234476
Query 281796 CATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTC 281855
| ||||| || | || | || | | || |||||||| || | || | | | ||
Sbjct 234475 CGTCAGGGTTGATAGACTTGTTGGGCTCCTTGCCATTGAAGAAGTCGGAGACCATCT-TC 234417
Query 281856 TT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTA 281914
| | ||| || ||||| | || || || || || || ||||| || || ||||||
Sbjct 234416 TGGATCTTGGGGATACGGGTAGAACCACCGACCAAGACGATTTCGTGGACGGAAGATTTA 234357
Query 281915 TCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCT 281974
|| | ||| | || | || ||||| || || | | | || | ||
Sbjct 234356 TCGATTTTAGCGTCACGGAGGACACGCTCAACAGGCTCCATGGTGGAACGGAAGAGATCC 234297
Query 281975 GAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGA 282032
|||||||| ||||| || | ||| || || | || || |||| || |||
Sbjct 234296 TGGCAAAGTTCCTCGAAACGGGCACGAGT--GATGGAAGTGTAGAAGTCAACACCCTCGT 234239
Query 282033 ACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTT 282092
| | ||| || | |||||| | ||| || | | ||| || || | || || |||||||
Sbjct 234238 AGAGAGAGTCGATTTCAATAGAAGTCTGGGCAGCAGACGAGAGAGTGCGCTTGGCACGTT 234179
Query 282093 CACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATT--CAAATCTGTTTTATA 282150
| || || || | || | || | ||| || |||| || ||| | || |
Sbjct 234178 CGCAAGCAGTGCGGAGGCGGCGAAGGGCGCGAGC--ATTGGAGGACAGATCCTTCTTGTG 234121
Query 282151 TTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCC 282210
|| | |||||| || | ||| | | |||||||| || || ||||||||||| ||
Sbjct 234120 CTTACGCTTGAATTCGTTGACAAAGTGGTTGACAAGACGGTTGTCGAAATCTTCACCACC 234061
Query 282211 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 282270
||| | || | || | |||| | | || | || | || || || | | ||||||
Sbjct 234060 CAAGTGCGTGTCACCAGCAGTAGATTTGACCTCAAAGATACCCTCCTCGATGGTCAAAAG 234001
Query 282271 AGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 282330
|| |||||| || |||||||||| |||||| ||||| ||||| ||| ||
Sbjct 234000 AGAAACATCGAAAGTACCACCACCCAAATCAAAGATAAGGACATTGCGTTCGCCCTCAGC 233941
Query 282331 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 282390
|| || || | || ||||||| |||||| ||||| || || || || |||| | |||
Sbjct 233940 TTTCTTGTCCAAGCCGTACGCAATAGCAGCGGCAGTAGGCTCGTTGATGATTCGAAGAAC 233881
Query 282391 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 282450
||||| || ||||| || ||||| || ||||| || | || || || || || ||
Sbjct 233880 GTTAAGGCCGGCAATCAGACCAGCATCCTTGGTGGCCTGACGCTGAGAGTCATTGAAGTA 233821
Query 282451 TGCAGGAACAGTAATAACGGCATCTGTT 282478
||||| || |||| || |||| ||||
Sbjct 233820 AGCAGGGACGGTAACGACAGCAT-TGTT 233794
>seq1
Length=3145143
Score = 127 bits (140), Expect = 2e-23
Identities = 245/361 (68%), Gaps = 9/361 (2%)
Strand=Plus/Minus
Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253
|||||||||||||| ||||| | ||||| || | |||||| |||| |||| |||
Sbjct 1048163 TCAAAATCTTCACCACCCAAATGAGTATCACCAGCCGTAGCCAAGACTTCGAAAGCACCA 1048104
Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313
| |||| || | || || |||||| ||| |||||||| | ||| | | ||
Sbjct 1048103 TTATCAATGGAAAGAACAGACACATCAAAGGTACCACCACCAAGATCGTACACAA----- 1048049
Query 282314 TTCATTTC---TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370
| |||| || ||| | | ||||||||||| || |||| ||| || || || ||
Sbjct 1048048 -TGATTTGACGTTCGTCACCGGTCTTATCAAGACCGTAGGCAATAGCGGCGGCGGTAGGC 1047990
Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430
||||| | || | | ||||| | ||| ||||| |||| ||||| || |||||||||
Sbjct 1047989 TCATTGACAACACGAAGGACATTCAAACCGGCAATAGTTCCGGCATCCTTGGTGGCTTGT 1047930
Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCA 282490
||||| ||| || || || ||||| ||||||| || || || ||| ||| ||
Sbjct 1047929 CTTTGGTTATCATTGAAGTAGGCAGGGACAGTAACGACAGCGCTGGTGACTGGTTTGCCT 1047870
Query 282491 ATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGA 282550
| || | || ||| |||||||||| |||| ||| | || | | |||||||
Sbjct 1047869 AGGTACCCCTCGGCAATTTCCTTCATTTTACCCAAAACCATGGCAGACACCTCTTCTGGA 1047810
Query 282551 G 282551
|
Sbjct 1047809 G 1047809
Score = 107 bits (118), Expect = 1e-17
Identities = 158/223 (71%), Gaps = 7/223 (3%)
Strand=Plus/Plus
Query 282274 AACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTT 282333
|||||| ||| |||||||||| ||| | || || |||||| ||| ||||| || |
Sbjct 232291 AACATCGAAGGTACCACCACCCAAATCGTAGATGAGAACATTCCGTTCCTTGTC--GGAT 232348
Query 282334 TTTATCAAGACCA-----TACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAA 282388
|| || ||| || |||| ||||||||||| || || |||||||| | | |
Sbjct 232349 TTCCCGGAGCCCAATCCATAGGCAATGGCAGCAGCAGTAGGCTCGTTAATAATACGGAGA 232408
Query 282389 ACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAA 282448
|| || || ||||| || || |||||||| ||||| || | ||| ||||| |||
Sbjct 232409 ACGTTCAGTCCAGCGATGGCACCGGCATCTTTTGTGGCCTGACGTTGGTTGTCGTTGAAA 232468
Query 282449 TATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAA 282491
|| || |||||||||||||| || | | || | ||||||||
Sbjct 232469 TAGGCTGGAACAGTAATAACAGCCTTGGAGACCTTTTTTCCAA 232511
>seq3
Length=1865056
Score = 102 bits (112), Expect = 6e-16
Identities = 127/174 (73%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 432282 TTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCT 432341
|||| |||||||||||||| || || ||||||||||||||| ||||| ||| | ||
Sbjct 703056 TTGAAGGGTAAAGAAGGTCGGCTTCGACAAAATTTGATGGGAAAACGTGTTGATTTTTCA 702997
Query 432342 GCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTC 432401
|| ||||| ||||| || ||| || ||| | |||| | |||||||| ||||| ||
Sbjct 702996 GCCCGTACGGTTATAACGGGTGACCCCAATTTGTCTCTGGACGAAGTTGGCGTTCCCATC 702937
Query 432402 ATTATTGCGAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAT 432455
| ||||||| ||| || || | | ||| |||| || |||||||| ||
Sbjct 702936 AGTATTGCGCAAACACTGACATATCCGGAAGTTGTTACCCCCTATAATATTAAT 702883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740628485264814
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |