Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq6 122 8e-23
seq9 105 6e-18
>seq6
Length=1499889
Score = 122 bits (134), Expect = 8e-23
Identities = 245/361 (68%), Gaps = 7/361 (2%)
Strand=Plus/Plus
Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413
||| ||||| || || |||||||||||||| || ||||| | | ||| ||||| | |||
Sbjct 77886 GTAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGCAAGCGAGATGTTATCCAT 77945
Query 120414 AAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCG 120473
|| ||||| ||||| | | |||| | | |||| | ||| | ||| || | ||
Sbjct 77946 GAAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTGCCAAGAGCTACAAGTAACCG 78005
Query 120474 GTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCAC 120533
||| ||||| ||||| ||||| | |||||| ||| | ||||||||| || | ||
Sbjct 78006 GTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTTCATGCCAAGGAGAGCACA 78065
Query 120534 CGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC--G 120591
|| | || ||| || || || | ||| || ||||| || || ||| || ||
Sbjct 78066 TGGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCACGGCTTCAATGATGATTGCTGC 78125
Query 120592 AGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCAAAG 120651
| || | ||| | || | ||| || | | | | || ||||| ||||||
Sbjct 78126 AACAGCTTCTGGGCTGGGA--CGGTGGCGGAGGTGAG---AGAAGAGGAGGCAAGCAAAG 78180
Query 120652 TCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATG 120711
|| ||||| || |||||||| || || |||||||||||| || || ||||| ||||||
Sbjct 78181 TCAGTGTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGGCCAGGCATG 78240
Query 120712 A 120712
|
Sbjct 78241 A 78241
>seq9
Length=1275601
Score = 105 bits (116), Expect = 6e-18
Identities = 143/194 (74%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527
||||||||| |||||||| || | ||| | | | || || || |||||||| ||
Sbjct 1015837 CTCTTTCTGGATATTGTAGTCTGAAAGCGTACGGCCA-TCTTCAAGTTGCTTGCCGGCAA 1015779
Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-CTTGAGC 133586
| ||||| ||||| |||||||| || || |||||||| || ||| ||||| |||||
Sbjct 1015778 AGATGAGGCGCTGTTGGTCGGGTGGAATACCTTCCTTATCC-TGAATTTTTGTCTTGACA 1015720
Query 133587 TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646
| |||| |||||| | | || || || | |||| ||| |||||||| || |||||
Sbjct 1015719 TTGTCAATCGTGTCCGAAGATTCAACTTCTAATGTGATGGTCTTGCCGGTAAGTGTTTTG 1015660
Query 133647 ACGAAAATCTGCAT 133660
|| |||||||||||
Sbjct 1015659 ACAAAAATCTGCAT 1015646
Score = 102 bits (112), Expect = 8e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527
||| ||||| || ||||| ||| | ||| | | | || || ||||| || || |||
Sbjct 1015094 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCTTCAAGCTGTTTACCAGCGA 1015036
Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587
|||| | || || ||||| ||||||||||| |||||||| |||||| ||| | |
Sbjct 1015035 AAATCAAGCGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCTTGGATCTTAGTCTTAACAT 1014976
Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647
|||| || ||| ||| ||| || || | ||||| ||| ||||| ||||| || || |
Sbjct 1014975 TATCAATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGA 1014916
Query 133648 CGAAAATCTGCAT 133660
|||| ||||||||
Sbjct 1014915 CGAAGATCTGCAT 1014903
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||| |||||||| || || |||||||| || ||| ||||||||| || || ||
Sbjct 1015615 GGTAGACTCTTTTTGGATGTTGTAATCAGACAGTGTGCGGCCGTCCTCGAGTTGTTTACC 1015556
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || || |||||||| || ||||| ||||| || || |||||| ||
Sbjct 1015555 GGCGAAGATTAGGCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGAATCTTTGTTTT 1015496
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | ||| || | | ||| || || | |||| ||||| ||||| | ||
Sbjct 1015495 GACGTTGTCGATCGTATCAGAAGACTCAACTTCTAATGTGATTGTTTTTCCGGTTAAGGT 1015436
Query 133643 TTTTACGAAAATCTGCAT 133660
|||||||||||| |||||
Sbjct 1015435 TTTTACGAAAATTTGCAT 1015418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420564332360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |