Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq7 147 5e-30 >seq7 Length=1353353 Score = 147 bits (162), Expect = 5e-30 Identities = 451/692 (65%), Gaps = 19/692 (3%) Strand=Plus/Plus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 || ||||| ||||| || || || | | ||| |||| | |||| ||| | | | Sbjct 415530 TACTTTGGGTTCAAGACACTGGAGAGGTCGTATCTACTAAGAATCAACGGCAAAGTTGCT 415589 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCAT-----GGACATGATA 110418 |||||||| || || ||| || | || ||||| ||||||||||| |||||| | Sbjct 415590 GAACGTCCGCAGCATATGATTATGCGCGTTGCCGTTGGTATTCATCATGAGGACAT--TG 415647 Query 110419 TTAAAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATT---CATGCTA 110475 |||||| ||||| || | | | || || ||| | || || ||| Sbjct 415648 ATAAAGCG---ATTGAGACATACCACCTGAT--GTCCCAA-AAATTTTTTACCCACGCTT 415701 Query 110476 CTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAG 110535 |||| || || || || || ||||| | | ||| ||||||| ||||| ||| | | Sbjct 415702 CTCCCACACTTTTCAATGCGGGAACACCTCAACCACAGATGGCTTCCTGCTTCCTTATTG 415761 Query 110536 GAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTT 110595 || || || ||| |||||| || || |||||| | || || | |||||| |||| Sbjct 415762 ATATGAAGGAGGATAGTATTGAGGGGATCTATGATACACTGAAGACATGTGCTCTGATTT 415821 Query 110596 CTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATA 110655 | || | |||| || ||||| | ||||||| || || ||| || | | | Sbjct 415822 CCAAGACTGCTGGGGGTATTGGACTCAACGTTCACCGAATCCGTGCAACTGGCTCCTACA 415881 Query 110656 TCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACA 110715 | ||| | | || || | || | ||| | |||| ||| | | ||||| ||| | | Sbjct 415882 TTGCAGGAACAAATGGCTCCTCTAATGGGATCATTCCCATGCTTCGTGTCTTTAACAATA 415941 Query 110716 CTGCAAAATATGTGAATCAAGGTGGTAAGAGAAA---TGGCTCATTTGCTATCTATCTCG 110772 |||| | ||||||| |||| || || || | | ||| | |||||||| ||||| | Sbjct 415942 CTGCCAGATATGTGGATCAGGGCGGCAATAAACGCCCTGGTGCTTTTGCTATTTATCTTG 416001 Query 110773 AACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAG 110832 |||||||||| || || ||||||| || || || || ||||||||||| || |||| Sbjct 416002 AACCTTGGCACTCTGACGTATTTGAGTTTTTGGACCTCCGTAAAAATCATGGTAAAGAAG 416061 Query 110833 AACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTG 110892 || ||||| || ||| | || || | |||| | | || || ||||||||||| | Sbjct 416062 AAGTGAGAGCCCGAGATCTTTTCCTCGCCCTCTGGACTCCCGACTTGTTCATGAAACGGG 416121 Query 110893 TTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATG 110952 || | | |||||| ||| | || | ||||| | | |||| || | |||| Sbjct 416122 TTGAGAAGAATGGCGATTGGACACTATTCTGTCCAAACGAGGCATCTGGACTCGCCGATG 416181 Query 110953 TATATGGAAAAGAGTTTGAAGACCTTTACGAA 110984 | || ||| | || || || | || |||||| Sbjct 416182 TCTACGGAGACGAATTCGAGCAGCTATACGAA 416213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812206964479