Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq7 147 5e-30
>seq7
Length=1353353
Score = 147 bits (162), Expect = 5e-30
Identities = 451/692 (65%), Gaps = 19/692 (3%)
Strand=Plus/Plus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|| ||||| ||||| || || || | | ||| |||| | |||| ||| | | |
Sbjct 415530 TACTTTGGGTTCAAGACACTGGAGAGGTCGTATCTACTAAGAATCAACGGCAAAGTTGCT 415589
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCAT-----GGACATGATA 110418
|||||||| || || ||| || | || ||||| ||||||||||| |||||| |
Sbjct 415590 GAACGTCCGCAGCATATGATTATGCGCGTTGCCGTTGGTATTCATCATGAGGACAT--TG 415647
Query 110419 TTAAAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATT---CATGCTA 110475
|||||| ||||| || | | | || || ||| | || || |||
Sbjct 415648 ATAAAGCG---ATTGAGACATACCACCTGAT--GTCCCAA-AAATTTTTTACCCACGCTT 415701
Query 110476 CTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAG 110535
|||| || || || || || ||||| | | ||| ||||||| ||||| ||| | |
Sbjct 415702 CTCCCACACTTTTCAATGCGGGAACACCTCAACCACAGATGGCTTCCTGCTTCCTTATTG 415761
Query 110536 GAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTT 110595
|| || || ||| |||||| || || |||||| | || || | |||||| ||||
Sbjct 415762 ATATGAAGGAGGATAGTATTGAGGGGATCTATGATACACTGAAGACATGTGCTCTGATTT 415821
Query 110596 CTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATA 110655
| || | |||| || ||||| | ||||||| || || ||| || | | |
Sbjct 415822 CCAAGACTGCTGGGGGTATTGGACTCAACGTTCACCGAATCCGTGCAACTGGCTCCTACA 415881
Query 110656 TCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACA 110715
| ||| | | || || | || | ||| | |||| ||| | | ||||| ||| | |
Sbjct 415882 TTGCAGGAACAAATGGCTCCTCTAATGGGATCATTCCCATGCTTCGTGTCTTTAACAATA 415941
Query 110716 CTGCAAAATATGTGAATCAAGGTGGTAAGAGAAA---TGGCTCATTTGCTATCTATCTCG 110772
|||| | ||||||| |||| || || || | | ||| | |||||||| ||||| |
Sbjct 415942 CTGCCAGATATGTGGATCAGGGCGGCAATAAACGCCCTGGTGCTTTTGCTATTTATCTTG 416001
Query 110773 AACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAG 110832
|||||||||| || || ||||||| || || || || ||||||||||| || ||||
Sbjct 416002 AACCTTGGCACTCTGACGTATTTGAGTTTTTGGACCTCCGTAAAAATCATGGTAAAGAAG 416061
Query 110833 AACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTG 110892
|| ||||| || ||| | || || | |||| | | || || ||||||||||| |
Sbjct 416062 AAGTGAGAGCCCGAGATCTTTTCCTCGCCCTCTGGACTCCCGACTTGTTCATGAAACGGG 416121
Query 110893 TTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATG 110952
|| | | |||||| ||| | || | ||||| | | |||| || | ||||
Sbjct 416122 TTGAGAAGAATGGCGATTGGACACTATTCTGTCCAAACGAGGCATCTGGACTCGCCGATG 416181
Query 110953 TATATGGAAAAGAGTTTGAAGACCTTTACGAA 110984
| || ||| | || || || | || ||||||
Sbjct 416182 TCTACGGAGACGAATTCGAGCAGCTATACGAA 416213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812206964479
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |