Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq9 120 2e-22 >seq9 Length=1275601 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | ||| || || || | || || || ||||||||| ||||||||||| || Sbjct 1015645 ACCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGA 1015586 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 |||||||| |||| || | |||||| ||||| || || | || ||||| ||| | || Sbjct 1015585 CAGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGG 1015526 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || ||| || ||||| || | ||| | || || || || | Sbjct 1015525 GATACCTTCTTTATCTTGAATCTT-TGTTTTGACGTTGTCGATCGTATCAGAAGACTCAA 1015467 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| ||||| || ||||| |||||||| || || |||||| Sbjct 1015466 CTTCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCATA 1015417 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || || || ||||| || || |||||||| |||||||| ||||| | || || Sbjct 1015111 ACCAAGTGGAGGGTACTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCA 1015052 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||||| || || |||||||| || || || ||| | || | || || ||||| Sbjct 1015051 AGCTGTTTACCAGCGAAAATCAAGCGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCTTGG 1014992 Query 33661 ATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || || | ||||| ||| ||| ||||| || || || |||| ||||| || || Sbjct 1014991 ATCTTA-GTCTTAACATTATCAATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTT 1014933 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | || || || |||||||||||| Sbjct 1014932 GCCAGTCAGGGTCTTGACGAAGATCTGCATA 1014902 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597 || ||||| || |||||||||||||| || || ||||| || || || || || | || Sbjct 1015857 AAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAGTCTGAAAGCGTACGGCCATCT 1015798 Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657 || | ||| || |||||||| || | ||||| || || | || | |||||| || || Sbjct 1015797 TCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGAATACCTTCCTTATCC 1015738 Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716 |||||| ||| | |||| ||| | ||||| ||||| || || | ||||| || Sbjct 1015737 TGAATTTT-TGTCTTGACATTGTCAATCGTGTCCGAAGATTCAACTTCTAATGTGATGGT 1015679 Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || || | ||||| ||||| ||||||||| Sbjct 1015678 CTTGCCGGTAAGTGTTTTGACAAAAATCTGCATA 1015645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703843762880