Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq9 120 2e-22
>seq9
Length=1275601
Score = 120 bits (132), Expect = 2e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | ||| || || || | || || || ||||||||| ||||||||||| ||
Sbjct 1015645 ACCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGA 1015586
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|||||||| |||| || | |||||| ||||| || || | || ||||| ||| | ||
Sbjct 1015585 CAGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGG 1015526
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||| || ||| || ||||| || | ||| | || || || || |
Sbjct 1015525 GATACCTTCTTTATCTTGAATCTT-TGTTTTGACGTTGTCGATCGTATCAGAAGACTCAA 1015467
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| ||||| || ||||| |||||||| || || ||||||
Sbjct 1015466 CTTCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCATA 1015417
Score = 104 bits (114), Expect = 2e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600
||||| || || || ||||| || || |||||||| |||||||| ||||| | || ||
Sbjct 1015111 ACCAAGTGGAGGGTACTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCA 1015052
Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660
| ||||| || || |||||||| || || || ||| | || | || || |||||
Sbjct 1015051 AGCTGTTTACCAGCGAAAATCAAGCGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCTTGG 1014992
Query 33661 ATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719
|| || || | ||||| ||| ||| ||||| || || || |||| ||||| || ||
Sbjct 1014991 ATCTTA-GTCTTAACATTATCAATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTT 1014933
Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| || | || || || ||||||||||||
Sbjct 1014932 GCCAGTCAGGGTCTTGACGAAGATCTGCATA 1014902
Score = 104 bits (114), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597
|| ||||| || |||||||||||||| || || ||||| || || || || || | ||
Sbjct 1015857 AAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAGTCTGAAAGCGTACGGCCATCT 1015798
Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657
|| | ||| || |||||||| || | ||||| || || | || | |||||| || ||
Sbjct 1015797 TCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGAATACCTTCCTTATCC 1015738
Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716
|||||| ||| | |||| ||| | ||||| ||||| || || | ||||| ||
Sbjct 1015737 TGAATTTT-TGTCTTGACATTGTCAATCGTGTCCGAAGATTCAACTTCTAATGTGATGGT 1015679
Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| || || | ||||| ||||| |||||||||
Sbjct 1015678 CTTGCCGGTAAGTGTTTTGACAAAAATCTGCATA 1015645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703843762880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |