Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq9 129 6e-25 seq2 89.7 5e-13 >seq9 Length=1275601 Score = 129 bits (142), Expect = 6e-25 Identities = 160/217 (74%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGA- 134557 ||||| || ||||| || || || || ||||| |||||||| || || ||||| | Sbjct 1015632 CGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAG--ACAGTGTGCGGC 1015575 Query 134558 -GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTT 134616 ||| ||||| ||||| || || || || | || ||||| || || || || ||||||| Sbjct 1015574 CGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGGATACCTTCTT 1015515 Query 134617 TTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAA 134676 | |||||||| ||| |||||| ||| | || || || || || || || | || | Sbjct 1015514 TATCTTGAATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAACTTCTAATGTGA 1015455 Query 134677 TGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| |||||||| ||||| |||||||||||||| Sbjct 1015454 TTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||||| ||||| ||||||||||| || | |||| || || ||| Sbjct 1015398 ACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGACCATCCTCG 1015339 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || ||||| || || || ||||| || ||||| ||||| || ||||||||||| || || Sbjct 1015338 AGTTGTTTACCAGCGAAGATCAATCGTTGCTGGTCGGGGGGGATGCCTTCTTTGTCCTGG 1015279 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||| || ||| | || || || || || || || || ||||| || || Sbjct 1015278 ATCTTGGTTTTCACATTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTAATAGTCTTG 1015219 Query 134685 CCGGTTAAAGTTTTAAC 134701 || || | ||| || || Sbjct 1015218 CCAGTAAGAGTCTTGAC 1015202 >seq2 Length=1931404 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||||| ||||| || ||||||||||| Sbjct 802235 CCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 802176 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||||||||| || ||||||| ||||||||| || || || Sbjct 802175 AGGGTGCGGCCATCCTCCAGCTGTTTGCCGGCGAAAATCAGACGCTGCTGGTCAGGGGGG 802116 Query 134607 ATGCCTTCTTTTTCTTGAATTTTT 134630 ||||| || || ||| || |||| Sbjct 802115 ATGCCCTCCTTGTCTAGAGGTTTT 802092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398153618280