Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq9 129 6e-25
seq2 89.7 5e-13
>seq9
Length=1275601
Score = 129 bits (142), Expect = 6e-25
Identities = 160/217 (74%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGA- 134557
||||| || ||||| || || || || ||||| |||||||| || || ||||| |
Sbjct 1015632 CGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAG--ACAGTGTGCGGC 1015575
Query 134558 -GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTT 134616
||| ||||| ||||| || || || || | || ||||| || || || || |||||||
Sbjct 1015574 CGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGGATACCTTCTT 1015515
Query 134617 TTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAA 134676
| |||||||| ||| |||||| ||| | || || || || || || || | || |
Sbjct 1015514 TATCTTGAATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAACTTCTAATGTGA 1015455
Query 134677 TGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| ||||| |||||||| ||||| ||||||||||||||
Sbjct 1015454 TTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| || ||||| ||||| ||||||||||| || | |||| || || |||
Sbjct 1015398 ACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGACCATCCTCG 1015339
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
|| ||||| || || || ||||| || ||||| ||||| || ||||||||||| || ||
Sbjct 1015338 AGTTGTTTACCAGCGAAGATCAATCGTTGCTGGTCGGGGGGGATGCCTTCTTTGTCCTGG 1015279
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||| || ||| | || || || || || || || || ||||| || ||
Sbjct 1015278 ATCTTGGTTTTCACATTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTAATAGTCTTG 1015219
Query 134685 CCGGTTAAAGTTTTAAC 134701
|| || | ||| || ||
Sbjct 1015218 CCAGTAAGAGTCTTGAC 1015202
>seq2
Length=1931404
Score = 89.7 bits (98), Expect = 5e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || ||||| || ||||| ||||| || |||||||||||
Sbjct 802235 CCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 802176
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||||||||| || ||||||| ||||||||| || || ||
Sbjct 802175 AGGGTGCGGCCATCCTCCAGCTGTTTGCCGGCGAAAATCAGACGCTGCTGGTCAGGGGGG 802116
Query 134607 ATGCCTTCTTTTTCTTGAATTTTT 134630
||||| || || ||| || ||||
Sbjct 802115 ATGCCCTCCTTGTCTAGAGGTTTT 802092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398153618280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |