Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq7 286 5e-72
seq6 120 4e-22
>seq7
Length=1353353
Score = 286 bits (316), Expect = 5e-72
Identities = 638/944 (68%), Gaps = 18/944 (2%)
Strand=Plus/Minus
Query 69508 TATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACAC 69567
|||||| | |||||||| ||||| | ||||| | | ||||| || ||||||||
Sbjct 416209 TATAGCTGCTCGAATTCGTCTCCGTAGACATCGGCGAGTCCAGATGCCTCGTTTGGACAG 416150
Query 69568 ATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGA 69627
| | || ||| | ||| | || ||| |||||||| || | |||||| |||| ||
Sbjct 416149 AATAGTGTCCAATCGCCATTCTTCTCAACCCGTTTCATGAACAAGTCGGGAGTCCAGAGG 416090
Query 69628 GCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGA 69687
|| | || ||||||| || ||| |||||| || || |||||| || || | |
Sbjct 416089 GCGAGGAAAAGATCTCGGGCTCTCACTTCTTCTTTACCATGATTTTTACGGAGGTCCAAA 416030
Query 69688 AACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTA 69747
||||| | | ||||| ||||| ||||| ||||| || || | | || || ||||||
Sbjct 416029 AACTCAAATACGTCAGAGTGCCAAGGTTCAAGATAAATAGCAAAAGCACCAGGGCGTTTA 415970
Query 69748 TTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATA 69807
|| || |||||||| | ||||||||||| || ||| |||| | ||||| ||||| ||
Sbjct 415969 TTGCCGCCCTGATCCACATATCTGGCAGTATTGTTAAAGACACGAAGCATGGGAATGATC 415910
Query 69808 CCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATA 69867
|||||||| ||||||||||| | ||| || || |||| || || | | |
Sbjct 415909 CCATTAGAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTTGCACGGAT-TCGGTGAAC 415851
Query 69868 GAT-AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATA 69926
| | || || || || || || | || || || |||||||| |||| ||| |||||
Sbjct 415850 GTTGAGTCCAATACCCCCAGCAGTCTTGGAAATCAGAGCACATGTCTTCAGTGTATCATA 415791
Query 69927 TATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATG 69986
|| ||||| || ||||| || |||| | || ||| || ||| || ||| || | ||
Sbjct 415790 GATCCCCTCAATACTATCCTCCTTCATATCAATAAGGAAGCAGGAAGCCATCTGTGGTTG 415731
Query 69987 TATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAG 70046
||||||||||| || | ||| ||||| ||||| || || |||||| || | |||
Sbjct 415730 AGGTGTTCCCGCATTGAAAAGTGTGGGAGAAGCGTGGGTAAAAAATTTTTGGGACATCAG 415671
Query 70047 ATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCAT 70106
| |||||| ||||| ||| || || ||| |||||||| || | || || |||||
Sbjct 415670 GTGGTATGTCTCAATCGCTTTATCAATGTCCTCATGATGAATACCAACGGCAACGCGCAT 415611
Query 70107 CAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTC 70166
| ||||||||| || ||||| | ||| || ||| | | || || || | ||
Sbjct 415610 AATCATATGCTGCGGACGTTCAGCAACTTTGCCGTTGATTCTTAGTAGATACGACCTCTC 415551
Query 70167 CAGAGTTTTAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAA 70224
||| || || |||||||| || | ||| ||||| || | || |||| ||| | ||
Sbjct 415550 CAGTGTCTTGAACCCAAAGTACTGGTAGTTGAAA--TCACGGTCATAAACGATAGCGGAG 415493
Query 70225 TTTAGTTTATCCTTATATTTGGTAACTATATC-CATAACAGTAGGTGAGATAATCGG--- 70280
|| || | || | ||| | || ||||| ||| | | || || || ||
Sbjct 415492 TTCAGCTCTTCGGCGTGTTTCATTACAATATCGTATATTTTTCTG-GATATCATGGGAGC 415434
Query 70281 AGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAA 70340
|| || || || || || || ||||| | | | |||||| || || |||
Sbjct 415433 AGGGCGGTT---GTTCTTTGGGTTCACATATCTATAGAGATCTTCGATAACGGACGAAAA 415377
Query 70341 TAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATA 70400
| |||| || |||| |||||| || || || | ||| ||||| || || || || |||||
Sbjct 415376 TTGTTTCTTGGTTTGCTTGTGCAAGTTGGACACGGCGATTCTAGCAGCAAGGATGGCATA 415317
Query 70401 GTCAGGATGTTGTG-TAGTACAAGTA-GCTGCTATTTCCGCAGC 70442
||||| || ||| ||| || ||| || || ||||||||||
Sbjct 415316 ATCAGGGTG-GGTGACAGT-CATGTATGCAGCAGTTTCCGCAGC 415275
Score = 179 bits (198), Expect = 5e-40
Identities = 683/1058 (65%), Gaps = 23/1058 (2%)
Strand=Plus/Minus
Query 68404 GTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTT 68463
|| || ||||||||||| |||||||||| ||||| |||| || |||||||| ||
Sbjct 417373 GTCCGAAGATAGTACATGCCGGTTTTCAAACCTAATTTCCAGCCAGCAAAATGCATGCTA 417314
Query 68464 GTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATG 68523
|| | |||| | || || | ||||||||| | ||||| ||||||||||
Sbjct 417313 GTAATTTTGCCCATTGTGGGCTCCTTAAGATGAATATTGAGGGATTGGGATTGATCGATG 417254
Query 68524 AAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTC 68583
||||| || | |||||| ||||| | | |||| || |||| ||||||||| | ||||
Sbjct 417253 AAAGCACCACGATCTGCAGCCATCTGAACAATAGTCCGCTGAGAAATTTCCCATACAGTC 417194
Query 68584 TTAAAAATCTGTTTGATATCATCTGGAAGGCTCG---TATTTTGAATGGATCCACCATCG 68640
|| ||| |||||| ||||| || | | | |||||||||| || ||||||||
Sbjct 417193 TTGTAAAGGGCTTTGATGTCATCGGGGATATTGGGAATATTTTGAATTGAGCCACCATCA 417134
Query 68641 GATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGG 68700
| || || ||| || || | ||| ||| | | || | | || | ||
Sbjct 417133 GCGATGATGCGATTTTTCATGTTGTCAGACCAAAGTCCAAGGTCAACAAGATCTTTCAGA 417074
Query 68701 AGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTG 68760
|| || ||||| | ||| ||||| || | | |||| |||| || ||||| |
Sbjct 417073 AGCCATGGGTTAACAACTTGGAATTCTCCTGCAAGGACTCGCCGAGAATAGATATTTGAG 417014
Query 68761 GTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGAT-GCAGTTGGCAT 68819
|| ||||| || | |||| || || || ||||| || | | | ||||| |||||
Sbjct 417013 GTGTATGGCTCAAAGCATTCGTTGAAGCCAAGGATTTG-GCTGGTACTAGCAGTGGGCAT 416955
Query 68820 AGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTT 68879
||| || || | | ||| || | | ||| ||| || |||| | || |||
Sbjct 416954 AGGGGCAACAAGAAGACTGTTGCGTACACCGTGTTTTGCTATTTCTTTCTTAAGAGAAAC 416895
Query 68880 CCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACT 68939
|||||||||||| ||||| ||| || ||||| | ||| || || | |||||| | |
Sbjct 416894 CCAATCCCAAAGGTCAGAAGGTGTTACGTTCCACATATCATACTGCAAAATTCCCTGAGA 416835
Query 68940 TGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGC 68999
|| || || | ||||||||| || || ||||| | | ||||| || |||
Sbjct 416834 AACAGGAGAACCTTCATATGTTTCGTATGGGCCTTCGGTCTTTGAAAGTTCGCAGGATGC 416775
Query 69000 CTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAG 69059
| || | | |||||||| || || |||| |||| || | | || | ||
Sbjct 416774 AGTCAGGGCGGCATGGTAAATTGTCTCAAAGATCTGAATATTCAGCTGCTTAGCCT-GAG 416716
Query 69060 ACTA-TCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATAC 69118
| | || || || || ||| | | || ||||| || | ||| |||||||||| |
Sbjct 416715 AGGAGTCAAAAGGCAAACGTAGAGCCAAGAAGGCATCAGCGAGTCCTTGAACCCCAAGAG 416656
Query 69119 CGATAGGTCTATGTCTCTTATTTGAACTTTC-AGCTTCTGGAATAGGATAATAATTAATA 69177
| || || | ||| | | || ||||| |||||| |||| || || | || ||
Sbjct 416655 CAATTGGGCGATGAC-GGAAGTTACTCTTTCGAGCTTCGGGAACGGGGTAGTGGTTGTTA 416597
Query 69178 TCTATAATTTTATTAAGATTTCGGACTACTACTT---TAACCACGTCCTTTAGTTTGAGA 69234
|| || || || || | ||| || || || |||| | || ||| | | ||| |
Sbjct 416596 TCAATGATCTTGTTTAAATTGCGCACCACAACTTGGGTGACTGCGTGC---AATTTACCA 416540
Query 69235 AAATC-AAATCGTCCATCTATAAC--AAACATAT----TCAGTGCTACAGATGCTAGATT 69287
|| || | ||| || ||| | ||| ||| || || | |||||||||||
Sbjct 416539 AAGTCGTACTCG-CCGCGGATAGCGTCAACGTATGTTGGCAAAGCAAGTGATGCTAGATT 416481
Query 69288 ACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACA 69347
|| || || || |||| | | ||| | || || || ||||||| |||| ||
Sbjct 416480 GCACACGGCGACTTCATCGGGGGCAGTATACTCAATAATTTCCGTACATAAATTAGAACT 416421
Query 69348 TTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAAT 69407
| | ||||| || || || | ||| || ||||| |||||||| ||||||||||| ||
Sbjct 416420 TCTAATAGTTCCAAGGTTCTTCTGGTTGCTCTTCCGATTACAGGCATCCTTGTAAAGCAT 416361
Query 69408 AAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAG 69445
|| ||| | ||||| || | |||| ||| | ||||
Sbjct 416360 GAAAGGATTTCCAGTCTCGGTTTGAGCTTCCAAGATAG 416323
>seq6
Length=1499889
Score = 120 bits (132), Expect = 4e-22
Identities = 291/441 (66%), Gaps = 0/441 (0%)
Strand=Plus/Plus
Query 39325 TTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 39384
||||||||| || ||||| || ||||| ||||| || || ||||| | | || || ||
Sbjct 77880 TTTTTGGTAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGCAAGCGAGATGTT 77939
Query 39385 TTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAAT 39444
|||||||| || || || || || | ||||| | ||| || || | || ||
Sbjct 77940 ATCCATGAAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTGCCAAGAGCTACAAG 77999
Query 39445 CAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAG 39504
|| | || || || || || |||||| ||||| | | ||||| || | |||
Sbjct 78000 TAACCGGTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTTCATGCCAAGGAG 78059
Query 39505 TTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564
| ||| ||||| ||||||| || |||| ||||| || ||||| || | || ||
Sbjct 78060 AGCACATGGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCACGGCTTCAATGATGAT 78119
Query 39565 CGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAA 39624
| || || | || || || | || | || || | | ||| || ||
Sbjct 78120 TGCTGCAACAGCTTCTGGGCTGGGACGGTGGCGGAGGTGAGAGAAGAGGAGGCAAGCAAA 78179
Query 39625 GTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCAT 39684
|||| || || ||||| || | | || | ||||| || || || || ||||||||
Sbjct 78180 GTCAGTGTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGGCCAGGCAT 78239
Query 39685 TAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTC 39744
||||||||||| || | ||| || || | ||||||||| ||| |||||||| || ||
Sbjct 78240 GAGACCACGCTTCTTTAACCAGAAAATAGAAGCAAAAGAACCACTGAAGAAGATACCCTC 78299
Query 39745 TACTGCTGCAAATGCAACAAG 39765
|| || || || |||| |||
Sbjct 78300 AACAGCGGCGAAAGCAATAAG 78320
Score = 102 bits (112), Expect = 1e-16
Identities = 226/336 (67%), Gaps = 11/336 (3%)
Strand=Plus/Plus
Query 39839 GTTTCTATAGCATTAAAGAGATAA-TGTTTTTCATCACTATCTTTAACATATGTATCTAT 39897
|| || ||||||| ||||||||| | || | || | ||||| | ||||| || ||
Sbjct 78451 GTATCGATAGCATCAAAGAGATAGGTACGTTGCTTCGGT-TCTTTGATGTATGTGTCAAT 78509
Query 39898 TAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACA 39957
| || || ||||||||||||||||||| ||| ||||||||||| || |||||
Sbjct 78510 CAGAAGGGAGTATGTTTCTGAATGGATGTTTTCCATCATGATCTGAAATCCATAGAAACA 78569
Query 39958 TCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTAT 40017
| || || | ||||| || || || || | ||| | | || || || || ||
Sbjct 78570 ACGGGCCTCTGGGATTTGGACTTCACCACTGAAGCGCTCCACAAGGTTCTCGTTGACAAT 78629
Query 40018 TCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATAT------TTTTCATC 40071
||| ||| |||||| || ||||||| ||| | | ||| ||| | ||||
Sbjct 78630 TCCGTCAGAAGCGGCGAAGAATGCCAGCACACGAGAGACAAAGTATCGCTCGTCATCATT 78689
Query 40072 GGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCA 40131
| || | || |||||||| | | |||||| || | || | || ||||| |||||
Sbjct 78690 GAGTTT---GTTGTTCCAGTCGTGAAGATCTTTGGACAAGTCGATCTCCTCAGCAGTCCA 78746
Query 40132 AAACGACGCCTCTGCCTTTTTGTACATGTTCCATAT 40167
|| || || || ||||| |||||||| | ||| ||
Sbjct 78747 GAAAGATGCTTCAGCCTTCTTGTACATTTGCCAGAT 78782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908465131960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |