Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq7 286 5e-72 seq6 120 4e-22 >seq7 Length=1353353 Score = 286 bits (316), Expect = 5e-72 Identities = 638/944 (68%), Gaps = 18/944 (2%) Strand=Plus/Minus Query 69508 TATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACAC 69567 |||||| | |||||||| ||||| | ||||| | | ||||| || |||||||| Sbjct 416209 TATAGCTGCTCGAATTCGTCTCCGTAGACATCGGCGAGTCCAGATGCCTCGTTTGGACAG 416150 Query 69568 ATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGA 69627 | | || ||| | ||| | || ||| |||||||| || | |||||| |||| || Sbjct 416149 AATAGTGTCCAATCGCCATTCTTCTCAACCCGTTTCATGAACAAGTCGGGAGTCCAGAGG 416090 Query 69628 GCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGA 69687 || | || ||||||| || ||| |||||| || || |||||| || || | | Sbjct 416089 GCGAGGAAAAGATCTCGGGCTCTCACTTCTTCTTTACCATGATTTTTACGGAGGTCCAAA 416030 Query 69688 AACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTA 69747 ||||| | | ||||| ||||| ||||| ||||| || || | | || || |||||| Sbjct 416029 AACTCAAATACGTCAGAGTGCCAAGGTTCAAGATAAATAGCAAAAGCACCAGGGCGTTTA 415970 Query 69748 TTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATA 69807 || || |||||||| | ||||||||||| || ||| |||| | ||||| ||||| || Sbjct 415969 TTGCCGCCCTGATCCACATATCTGGCAGTATTGTTAAAGACACGAAGCATGGGAATGATC 415910 Query 69808 CCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATA 69867 |||||||| ||||||||||| | ||| || || |||| || || | | | Sbjct 415909 CCATTAGAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTTGCACGGAT-TCGGTGAAC 415851 Query 69868 GAT-AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATA 69926 | | || || || || || || | || || || |||||||| |||| ||| ||||| Sbjct 415850 GTTGAGTCCAATACCCCCAGCAGTCTTGGAAATCAGAGCACATGTCTTCAGTGTATCATA 415791 Query 69927 TATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATG 69986 || ||||| || ||||| || |||| | || ||| || ||| || ||| || | || Sbjct 415790 GATCCCCTCAATACTATCCTCCTTCATATCAATAAGGAAGCAGGAAGCCATCTGTGGTTG 415731 Query 69987 TATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAG 70046 ||||||||||| || | ||| ||||| ||||| || || |||||| || | ||| Sbjct 415730 AGGTGTTCCCGCATTGAAAAGTGTGGGAGAAGCGTGGGTAAAAAATTTTTGGGACATCAG 415671 Query 70047 ATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCAT 70106 | |||||| ||||| ||| || || ||| |||||||| || | || || ||||| Sbjct 415670 GTGGTATGTCTCAATCGCTTTATCAATGTCCTCATGATGAATACCAACGGCAACGCGCAT 415611 Query 70107 CAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTC 70166 | ||||||||| || ||||| | ||| || ||| | | || || || | || Sbjct 415610 AATCATATGCTGCGGACGTTCAGCAACTTTGCCGTTGATTCTTAGTAGATACGACCTCTC 415551 Query 70167 CAGAGTTTTAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAA 70224 ||| || || |||||||| || | ||| ||||| || | || |||| ||| | || Sbjct 415550 CAGTGTCTTGAACCCAAAGTACTGGTAGTTGAAA--TCACGGTCATAAACGATAGCGGAG 415493 Query 70225 TTTAGTTTATCCTTATATTTGGTAACTATATC-CATAACAGTAGGTGAGATAATCGG--- 70280 || || | || | ||| | || ||||| ||| | | || || || || Sbjct 415492 TTCAGCTCTTCGGCGTGTTTCATTACAATATCGTATATTTTTCTG-GATATCATGGGAGC 415434 Query 70281 AGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAA 70340 || || || || || || || ||||| | | | |||||| || || ||| Sbjct 415433 AGGGCGGTT---GTTCTTTGGGTTCACATATCTATAGAGATCTTCGATAACGGACGAAAA 415377 Query 70341 TAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATA 70400 | |||| || |||| |||||| || || || | ||| ||||| || || || || ||||| Sbjct 415376 TTGTTTCTTGGTTTGCTTGTGCAAGTTGGACACGGCGATTCTAGCAGCAAGGATGGCATA 415317 Query 70401 GTCAGGATGTTGTG-TAGTACAAGTA-GCTGCTATTTCCGCAGC 70442 ||||| || ||| ||| || ||| || || |||||||||| Sbjct 415316 ATCAGGGTG-GGTGACAGT-CATGTATGCAGCAGTTTCCGCAGC 415275 Score = 179 bits (198), Expect = 5e-40 Identities = 683/1058 (65%), Gaps = 23/1058 (2%) Strand=Plus/Minus Query 68404 GTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTT 68463 || || ||||||||||| |||||||||| ||||| |||| || |||||||| || Sbjct 417373 GTCCGAAGATAGTACATGCCGGTTTTCAAACCTAATTTCCAGCCAGCAAAATGCATGCTA 417314 Query 68464 GTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATG 68523 || | |||| | || || | ||||||||| | ||||| |||||||||| Sbjct 417313 GTAATTTTGCCCATTGTGGGCTCCTTAAGATGAATATTGAGGGATTGGGATTGATCGATG 417254 Query 68524 AAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTC 68583 ||||| || | |||||| ||||| | | |||| || |||| ||||||||| | |||| Sbjct 417253 AAAGCACCACGATCTGCAGCCATCTGAACAATAGTCCGCTGAGAAATTTCCCATACAGTC 417194 Query 68584 TTAAAAATCTGTTTGATATCATCTGGAAGGCTCG---TATTTTGAATGGATCCACCATCG 68640 || ||| |||||| ||||| || | | | |||||||||| || |||||||| Sbjct 417193 TTGTAAAGGGCTTTGATGTCATCGGGGATATTGGGAATATTTTGAATTGAGCCACCATCA 417134 Query 68641 GATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGG 68700 | || || ||| || || | ||| ||| | | || | | || | || Sbjct 417133 GCGATGATGCGATTTTTCATGTTGTCAGACCAAAGTCCAAGGTCAACAAGATCTTTCAGA 417074 Query 68701 AGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTG 68760 || || ||||| | ||| ||||| || | | |||| |||| || ||||| | Sbjct 417073 AGCCATGGGTTAACAACTTGGAATTCTCCTGCAAGGACTCGCCGAGAATAGATATTTGAG 417014 Query 68761 GTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGAT-GCAGTTGGCAT 68819 || ||||| || | |||| || || || ||||| || | | | ||||| ||||| Sbjct 417013 GTGTATGGCTCAAAGCATTCGTTGAAGCCAAGGATTTG-GCTGGTACTAGCAGTGGGCAT 416955 Query 68820 AGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTT 68879 ||| || || | | ||| || | | ||| ||| || |||| | || ||| Sbjct 416954 AGGGGCAACAAGAAGACTGTTGCGTACACCGTGTTTTGCTATTTCTTTCTTAAGAGAAAC 416895 Query 68880 CCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACT 68939 |||||||||||| ||||| ||| || ||||| | ||| || || | |||||| | | Sbjct 416894 CCAATCCCAAAGGTCAGAAGGTGTTACGTTCCACATATCATACTGCAAAATTCCCTGAGA 416835 Query 68940 TGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGC 68999 || || || | ||||||||| || || ||||| | | ||||| || ||| Sbjct 416834 AACAGGAGAACCTTCATATGTTTCGTATGGGCCTTCGGTCTTTGAAAGTTCGCAGGATGC 416775 Query 69000 CTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAG 69059 | || | | |||||||| || || |||| |||| || | | || | || Sbjct 416774 AGTCAGGGCGGCATGGTAAATTGTCTCAAAGATCTGAATATTCAGCTGCTTAGCCT-GAG 416716 Query 69060 ACTA-TCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATAC 69118 | | || || || || ||| | | || ||||| || | ||| |||||||||| | Sbjct 416715 AGGAGTCAAAAGGCAAACGTAGAGCCAAGAAGGCATCAGCGAGTCCTTGAACCCCAAGAG 416656 Query 69119 CGATAGGTCTATGTCTCTTATTTGAACTTTC-AGCTTCTGGAATAGGATAATAATTAATA 69177 | || || | ||| | | || ||||| |||||| |||| || || | || || Sbjct 416655 CAATTGGGCGATGAC-GGAAGTTACTCTTTCGAGCTTCGGGAACGGGGTAGTGGTTGTTA 416597 Query 69178 TCTATAATTTTATTAAGATTTCGGACTACTACTT---TAACCACGTCCTTTAGTTTGAGA 69234 || || || || || | ||| || || || |||| | || ||| | | ||| | Sbjct 416596 TCAATGATCTTGTTTAAATTGCGCACCACAACTTGGGTGACTGCGTGC---AATTTACCA 416540 Query 69235 AAATC-AAATCGTCCATCTATAAC--AAACATAT----TCAGTGCTACAGATGCTAGATT 69287 || || | ||| || ||| | ||| ||| || || | ||||||||||| Sbjct 416539 AAGTCGTACTCG-CCGCGGATAGCGTCAACGTATGTTGGCAAAGCAAGTGATGCTAGATT 416481 Query 69288 ACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACA 69347 || || || || |||| | | ||| | || || || ||||||| |||| || Sbjct 416480 GCACACGGCGACTTCATCGGGGGCAGTATACTCAATAATTTCCGTACATAAATTAGAACT 416421 Query 69348 TTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAAT 69407 | | ||||| || || || | ||| || ||||| |||||||| ||||||||||| || Sbjct 416420 TCTAATAGTTCCAAGGTTCTTCTGGTTGCTCTTCCGATTACAGGCATCCTTGTAAAGCAT 416361 Query 69408 AAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAG 69445 || ||| | ||||| || | |||| ||| | |||| Sbjct 416360 GAAAGGATTTCCAGTCTCGGTTTGAGCTTCCAAGATAG 416323 >seq6 Length=1499889 Score = 120 bits (132), Expect = 4e-22 Identities = 291/441 (66%), Gaps = 0/441 (0%) Strand=Plus/Plus Query 39325 TTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 39384 ||||||||| || ||||| || ||||| ||||| || || ||||| | | || || || Sbjct 77880 TTTTTGGTAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGCAAGCGAGATGTT 77939 Query 39385 TTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAAT 39444 |||||||| || || || || || | ||||| | ||| || || | || || Sbjct 77940 ATCCATGAAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTGCCAAGAGCTACAAG 77999 Query 39445 CAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAG 39504 || | || || || || || |||||| ||||| | | ||||| || | ||| Sbjct 78000 TAACCGGTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTTCATGCCAAGGAG 78059 Query 39505 TTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564 | ||| ||||| ||||||| || |||| ||||| || ||||| || | || || Sbjct 78060 AGCACATGGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCACGGCTTCAATGATGAT 78119 Query 39565 CGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAA 39624 | || || | || || || | || | || || | | ||| || || Sbjct 78120 TGCTGCAACAGCTTCTGGGCTGGGACGGTGGCGGAGGTGAGAGAAGAGGAGGCAAGCAAA 78179 Query 39625 GTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCAT 39684 |||| || || ||||| || | | || | ||||| || || || || |||||||| Sbjct 78180 GTCAGTGTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGGCCAGGCAT 78239 Query 39685 TAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTC 39744 ||||||||||| || | ||| || || | ||||||||| ||| |||||||| || || Sbjct 78240 GAGACCACGCTTCTTTAACCAGAAAATAGAAGCAAAAGAACCACTGAAGAAGATACCCTC 78299 Query 39745 TACTGCTGCAAATGCAACAAG 39765 || || || || |||| ||| Sbjct 78300 AACAGCGGCGAAAGCAATAAG 78320 Score = 102 bits (112), Expect = 1e-16 Identities = 226/336 (67%), Gaps = 11/336 (3%) Strand=Plus/Plus Query 39839 GTTTCTATAGCATTAAAGAGATAA-TGTTTTTCATCACTATCTTTAACATATGTATCTAT 39897 || || ||||||| ||||||||| | || | || | ||||| | ||||| || || Sbjct 78451 GTATCGATAGCATCAAAGAGATAGGTACGTTGCTTCGGT-TCTTTGATGTATGTGTCAAT 78509 Query 39898 TAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACA 39957 | || || ||||||||||||||||||| ||| ||||||||||| || ||||| Sbjct 78510 CAGAAGGGAGTATGTTTCTGAATGGATGTTTTCCATCATGATCTGAAATCCATAGAAACA 78569 Query 39958 TCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTAT 40017 | || || | ||||| || || || || | ||| | | || || || || || Sbjct 78570 ACGGGCCTCTGGGATTTGGACTTCACCACTGAAGCGCTCCACAAGGTTCTCGTTGACAAT 78629 Query 40018 TCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATAT------TTTTCATC 40071 ||| ||| |||||| || ||||||| ||| | | ||| ||| | |||| Sbjct 78630 TCCGTCAGAAGCGGCGAAGAATGCCAGCACACGAGAGACAAAGTATCGCTCGTCATCATT 78689 Query 40072 GGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCA 40131 | || | || |||||||| | | |||||| || | || | || ||||| ||||| Sbjct 78690 GAGTTT---GTTGTTCCAGTCGTGAAGATCTTTGGACAAGTCGATCTCCTCAGCAGTCCA 78746 Query 40132 AAACGACGCCTCTGCCTTTTTGTACATGTTCCATAT 40167 || || || || ||||| |||||||| | ||| || Sbjct 78747 GAAAGATGCTTCAGCCTTCTTGTACATTTGCCAGAT 78782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908465131960