Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq9 114 1e-20 seq7 109 5e-19 >seq9 Length=1275601 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || |||||||||||||| || | || | ||||| |||||||| || ||||| || | Sbjct 1015644 CCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGAC 1015585 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| |||| ||||| |||||||||||| | || || || || || || || || Sbjct 1015584 AGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGG 1015525 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| |||||||| ||||| |||| | | | || | || || | | |||||| Sbjct 1015524 ATACCTTCTTTATCTTGAATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAACT 1015465 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||| || || | ||| || || | ||||| || || ||||||||| Sbjct 1015464 TCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCATA 1015417 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 || ||||| ||||| | ||| ||||| || | || ||||| || ||||||||||| Sbjct 1015875 TTTCCTCCACGCAATCTCAAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAGTCT 1015816 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 | | || | ||||| || || || ||||| | ||||| |||||||| || || Sbjct 1015815 GAAAGCGTACGGCCATCTTCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGT 1015756 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | ||| || ||||| || || | || | | || | ||||| | | |||| Sbjct 1015755 GGAATACCTTCCTTATCCTGAATTTTTGTCTTGACATTGTCAATCGTGTCCGAAGATTCA 1015696 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||||||| || || | ||||| || || ||||| ||||| || |||||| Sbjct 1015695 ACTTCTAATGTGATGGTCTTGCCGGTAAGTGTTTTGACAAAAATCTGCATA 1015645 >seq7 Length=1353353 Score = 109 bits (120), Expect = 5e-19 Identities = 324/492 (66%), Gaps = 11/492 (2%) Strand=Plus/Minus Query 131609 TCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCC 131668 ||| | ||||| | ||| | ||| |||| |||| ||||| || ||||| ||||| || Sbjct 416161 TCGTTTGGACAGAATAGTGTCCAATCGCCATTCTTCTCAACCCGTTTCATGAACAAGTCG 416102 Query 131669 GGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAttttt 131728 || ||| | ||| || ||||||| ||| | |||||| |||| || |||||| Sbjct 416101 GGAGTCCAGAGGGCGAGGAAAAGATCTCGGGCTCTCACTTCTTCTTTACC-ATGATTTTT 416043 Query 131729 ttCAAATTT-AAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGC 131787 | | ||||| || || | ||| | ||||| ||||| | ||| | || | || Sbjct 416042 ACGGAGGTCCAAAAACTCAAATACGTCAGAGTGCCAAGGTTCAAGATAAATAGCAAAAGC 415983 Query 131788 GCCTTTGCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAA 131844 || ||| ||| ||||| |||| |||| | | | ||||| | || || | Sbjct 415982 ACCAGGGCGTTTATTGCCGCCCTGATCCACATATCTGGCAGTATTGTTAAAGACACGAAG 415923 Query 131845 CATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCT 131904 |||||| | || || | | ||||| || | ||||||| |||| | || | Sbjct 415922 CATGGGAATGATCCCATTAGAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTTGCACG 415863 Query 131905 GATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGG 131963 |||| ||||||||||||||||||||| || || || || || || || || ||| | Sbjct 415862 GATTCGGTGAACGTTGAGTCCAATACCCCCAGCAGT-CTTGGAAATCAGAGCACATGTCT 415804 Query 131964 TTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGG 132023 | || || | |||||| || || | || ||| | || || | | ||||| || | Sbjct 415803 TCAGTGTATCATAGATCCCCTCAATACTATCCTCCTTCATATCAATAAGGAAGCAGGAAG 415744 Query 132024 ACAACTGTTGGTGAAATGTGCCGGC--TGAAAACAATGTGGGGCTGGCGTGTGTAAAAAG 132081 || |||| | ||| ||| || || ||||| | |||||| ||||| ||||||| Sbjct 415743 CCATCTGTGGTTGAGGTGTTCCCGCATTGAAA--AGTGTGGGAGAAGCGTGGGTAAAAAA 415686 Query 132082 TTTTTTGGCCAT 132093 ||||| || ||| Sbjct 415685 TTTTTGGGACAT 415674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934198023368