Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq9 114 1e-20
seq7 109 5e-19
>seq9
Length=1275601
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| |||||||||||||| || | || | ||||| |||||||| || ||||| || |
Sbjct 1015644 CCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGAC 1015585
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| |||| ||||| |||||||||||| | || || || || || || || ||
Sbjct 1015584 AGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGG 1015525
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||| |||||||| ||||| |||| | | | || | || || | | ||||||
Sbjct 1015524 ATACCTTCTTTATCTTGAATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAACT 1015465
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|||| || || | ||| || || | ||||| || || |||||||||
Sbjct 1015464 TCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCATA 1015417
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077
|| ||||| ||||| | ||| ||||| || | || ||||| || |||||||||||
Sbjct 1015875 TTTCCTCCACGCAATCTCAAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAGTCT 1015816
Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137
| | || | ||||| || || || ||||| | ||||| |||||||| || ||
Sbjct 1015815 GAAAGCGTACGGCCATCTTCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGT 1015756
Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197
|| | ||| || ||||| || || | || | | || | ||||| | | ||||
Sbjct 1015755 GGAATACCTTCCTTATCCTGAATTTTTGTCTTGACATTGTCAATCGTGTCCGAAGATTCA 1015696
Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||||||| || || | ||||| || || ||||| ||||| || ||||||
Sbjct 1015695 ACTTCTAATGTGATGGTCTTGCCGGTAAGTGTTTTGACAAAAATCTGCATA 1015645
>seq7
Length=1353353
Score = 109 bits (120), Expect = 5e-19
Identities = 324/492 (66%), Gaps = 11/492 (2%)
Strand=Plus/Minus
Query 131609 TCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCC 131668
||| | ||||| | ||| | ||| |||| |||| ||||| || ||||| ||||| ||
Sbjct 416161 TCGTTTGGACAGAATAGTGTCCAATCGCCATTCTTCTCAACCCGTTTCATGAACAAGTCG 416102
Query 131669 GGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAttttt 131728
|| ||| | ||| || ||||||| ||| | |||||| |||| || ||||||
Sbjct 416101 GGAGTCCAGAGGGCGAGGAAAAGATCTCGGGCTCTCACTTCTTCTTTACC-ATGATTTTT 416043
Query 131729 ttCAAATTT-AAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGC 131787
| | ||||| || || | ||| | ||||| ||||| | ||| | || | ||
Sbjct 416042 ACGGAGGTCCAAAAACTCAAATACGTCAGAGTGCCAAGGTTCAAGATAAATAGCAAAAGC 415983
Query 131788 GCCTTTGCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAA 131844
|| ||| ||| ||||| |||| |||| | | | ||||| | || || |
Sbjct 415982 ACCAGGGCGTTTATTGCCGCCCTGATCCACATATCTGGCAGTATTGTTAAAGACACGAAG 415923
Query 131845 CATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCT 131904
|||||| | || || | | ||||| || | ||||||| |||| | || |
Sbjct 415922 CATGGGAATGATCCCATTAGAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTTGCACG 415863
Query 131905 GATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGG 131963
|||| ||||||||||||||||||||| || || || || || || || || ||| |
Sbjct 415862 GATTCGGTGAACGTTGAGTCCAATACCCCCAGCAGT-CTTGGAAATCAGAGCACATGTCT 415804
Query 131964 TTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGG 132023
| || || | |||||| || || | || ||| | || || | | ||||| || |
Sbjct 415803 TCAGTGTATCATAGATCCCCTCAATACTATCCTCCTTCATATCAATAAGGAAGCAGGAAG 415744
Query 132024 ACAACTGTTGGTGAAATGTGCCGGC--TGAAAACAATGTGGGGCTGGCGTGTGTAAAAAG 132081
|| |||| | ||| ||| || || ||||| | |||||| ||||| |||||||
Sbjct 415743 CCATCTGTGGTTGAGGTGTTCCCGCATTGAAA--AGTGTGGGAGAAGCGTGGGTAAAAAA 415686
Query 132082 TTTTTTGGCCAT 132093
||||| || |||
Sbjct 415685 TTTTTGGGACAT 415674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934198023368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |