Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq7 120 4e-22 seq6 102 1e-16 >seq7 Length=1353353 Score = 120 bits (132), Expect = 4e-22 Identities = 421/656 (64%), Gaps = 15/656 (2%) Strand=Plus/Minus Query 111503 TCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACC 111562 |||| ||| || | ||||| || ||||||||| || | ||| | ||| | ||||||| Sbjct 416179 TCGGCGAGTCCAGATGCCTCGTTTGGACAGAATAGTGTCCAATCGCCATTCTTCTCAACC 416120 Query 111563 CGCTTCATGAAAAGGTCTGGAATCCACAGGG--ATGAAAAGAGATCTCTACACCGAGCCT 111620 || |||||||| | ||| ||| |||| |||| | ||||||| |||| | | | Sbjct 416119 CGTTTCATGAACAAGTCGGGAGTCCAGAGGGCGAGGAAAAGA--TCTCGGGCTCTCACTT 416062 Query 111621 CTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT 111680 |||| | ||| || || || | || | ||||| | | || | |||||| || | Sbjct 416061 CTTCTTTACCATGATTTTTACGGAGGTCCAAAAACTCAAATACGTCAGAGTGCCAAGGTT 416002 Query 111681 CAAGATAGACTGCGATAGATCCC-------TTTCGACGCCCAGCTTGATTTACATAGCGC 111733 ||||||| | || | || || | | | ||||| |||| ||||| | Sbjct 416001 CAAGATAAATAGCAAAAGCACCAGGGCGTTTATTGCCGCCC----TGATCCACATATCTG 415946 Query 111734 GCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCC 111793 || || |||||| || |||||||| ||||| || |||| || |||||||| || Sbjct 415945 GCAGTATTGTTAAAGACACGAAGCATGGGAATGATCCCATTAGAGGAGCCATTTGTTCCT 415886 Query 111794 CGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCAC 111853 ||| || | | || | | || | || | |||||||||||||| | Sbjct 415885 GCAATGTAGGAGCCAGTTGCACGGATTCGGTGAACGTTGAGTCCAATACCCCCAGCAGTC 415826 Query 111854 TTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG 111913 || || || | ||||| | | || || ||||||| || | || |||||||| Sbjct 415825 TTGGAAATCAGAGCACATGTCTTCAGTGTATCATAGATCCCCTCAATACTATCCTCCTTC 415766 Query 111914 TTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTT 111973 | | ||||||||||| | |||||| ||| ||||| || |||||||| || || Sbjct 415765 ATATCAATAAGGAAGCAGGAAGCCATCTGTGGTTGAGGTGTTCCCGCATTGAAAAGTGTG 415706 Query 111974 GGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCA 112033 || | ||||| | || | |||||||||| || ||||||||| | | |||| Sbjct 415705 GGAGAAGCGTGGGTAAAAAATTTTTGGGACATCAGGTGGTATGTCTCAATCGCTTTATCA 415646 Query 112034 ATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATG 112093 ||||| || || || || | || || ||||| | ||| | ||| || ||| Sbjct 415645 ATGTCCTCATGATGAATACCAACGGCAACGCGCATAATCATATGCTGCGGACGTTCAGCA 415586 Query 112094 AGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149 | |||| | || | | | ||||| | |||| || || |||| |||||||| Sbjct 415585 ACTTTGCCGTTGATTCTTAGTAGATACGACCTCTCCAGTGTCTTGAACCCAAAGTA 415530 Score = 111 bits (122), Expect = 2e-19 Identities = 462/722 (64%), Gaps = 24/722 (3%) Strand=Plus/Minus Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767 ||||| |||| |||||||| ||||||||||| || || | |||||| ||| Sbjct 417025 TAGATATTTGAGGTGTATGGCTCAAAGCATTCGTTGAAGCCAAGGATTTGGCTGGTACTA 416966 Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTG--ATGCGTT 110825 || || ||||| || || | | ||||||||| || | ||| | | ||| || || Sbjct 416965 GCAGTGGGCATAGGGGCAACAAGAAGACTGTTGCGTACACCGTGTT--TTGCTATTTCTT 416908 Query 110826 CCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883 ||| ||| | |||| || | | | || ||| | || |||| |||| ||| |||| Sbjct 416907 TCTTAAGAGAAACCCAATCCCAAAGGTCAGAA-GGTGTTACGTTCC-ACATATCATACTG 416850 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 | | || || || | |||||||| ||| | ||||| || | |||| || | | Sbjct 416849 CAAAATTCCCTGAGAAACAGGAGAACCTTCATATGTTTCGTATGGGCCTTCGGTCTTTGA 416790 Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003 | ||| ||| || ||||| || || || || || |||||||| || ||||| Sbjct 416789 AAGTTCGCAGGATGCAGTCAGGGCGGCATGGTAAATTGTCTCAAAGATCTGAATATTCAG 416730 Query 111004 CTCCTTGGCTTCATCTGAATCAAATG-----CGTAGCGGCACAAAATAAATACATCCGCG 111058 || ||| || | | || ||||| | ||||| | || || |||| ||| Sbjct 416729 CTGCTTAGCCTGAGAGGAGTCAAAAGGCAAACGTAGAGCCAAGAAGG-----CATCAGCG 416675 Query 111059 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA 111118 || |||||||| || | | |||| || | || || | ||| |||||| || | Sbjct 416674 AGTCCTTGAACCCCAAGAGCAATTGGGCGATGACGGAAGTTACTCTTTCGAGCTTCGGGA 416615 Query 111119 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 111178 ||||| || || | ||||||| ||||| ||| |||| | |||| | Sbjct 416614 ACGGGGTAGTGGTTGTTATCAATGATCTTGTTTAAATTGCGCACCACAACTTGGGTGACT 416555 Query 111179 TCATGAAGTTTTTCATAATCAAAAGTGC---GAGTCTCTTCATTGACATACTTTGGAAGG 111235 | || | ||| || | || | || | | | ||| || || |||| | Sbjct 416554 GCGTGCAATTTACCAAAGTCGTACTCGCCGCGGATAGCGTCA---ACGTATGTTGGCAAA 416498 Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295 || | |||||| | |||||| || || ||||| | || ||||| | |||||| Sbjct 416497 GCAAGTGATGCTAGATTGCACACGGCGACTTCATCGGGGGCAGTATACTCAATAATTTCC 416438 Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355 |||||||| || ||||| |||| || || | ||||| ||||| |||||| || || Sbjct 416437 GTACATAAATTAGAACTTCTAATAGTTCCAAGGTTCTTCTGGTTGCTCTTCCGATTACAG 416378 Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415 ||||||||||| |||||| | || | || ||||| || || | || | ||||| | | Sbjct 416377 GCATCCTTGTAAAGCATGAAAGGATTTCCAGTCTCGGTTTGAGCTTCCAAGATAGCGTAC 416318 Query 111416 CA 111417 || Sbjct 416317 CA 416316 >seq6 Length=1499889 Score = 102 bits (112), Expect = 1e-16 Identities = 290/443 (65%), Gaps = 12/443 (3%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 || || || || ||||||||||| ||||||||||| || |||| ||||| ||||| Sbjct 77887 TAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGCAAGCGAGATGTTATCCATG 77946 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 122485 ||||| ||||| ||| | | ||| || | | || |||| | || | Sbjct 77947 AAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTG-----CCAAGAGCTACAAGTA 78001 Query 122486 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGT 122545 || || | || |||| ||||| | | ||||| || |||||||| || | ||| Sbjct 78002 ACCGGTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTTCATGCCAAGGAGAG 78061 Query 122546 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 122605 |||||| || || ||| | ||| ||| ||| || || || || || | | ||| | Sbjct 78062 CACATGGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCACGGCTTCAATGATGATTG 78121 Query 122606 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACT 122665 | | || ||| | |||| | | || | |||||| ||||| | Sbjct 78122 CTGCAACAGCTTCTGGGCTGGGACGGTGGCGGAGGTGAGAGAAGAGGAGGCAAGCAAAGT 78181 Query 122666 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGA 122725 | ||| |||||||| || || || || || || || ||||| || || ||||||| Sbjct 78182 CAGTGTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGGCCAGGCATGA 78241 Query 122726 GACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCC 122784 |||| |||||||| ||||| |||||| ||| || || || ||||||||||||||| Sbjct 78242 GACCACGCTTCTTTAACCAGAAAATAGAAGCA-AAAGAACCACTGAAGAAGATACCCTCA 78300 Query 122785 ACACACGCAAACGCAAAAAGGCG 122807 ||| || || |||| ||| || Sbjct 78301 ACAGCGGCGAAAGCAATAAGACG 78323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031693834400