Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq7 120 4e-22
seq6 102 1e-16
>seq7
Length=1353353
Score = 120 bits (132), Expect = 4e-22
Identities = 421/656 (64%), Gaps = 15/656 (2%)
Strand=Plus/Minus
Query 111503 TCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACC 111562
|||| ||| || | ||||| || ||||||||| || | ||| | ||| | |||||||
Sbjct 416179 TCGGCGAGTCCAGATGCCTCGTTTGGACAGAATAGTGTCCAATCGCCATTCTTCTCAACC 416120
Query 111563 CGCTTCATGAAAAGGTCTGGAATCCACAGGG--ATGAAAAGAGATCTCTACACCGAGCCT 111620
|| |||||||| | ||| ||| |||| |||| | ||||||| |||| | | |
Sbjct 416119 CGTTTCATGAACAAGTCGGGAGTCCAGAGGGCGAGGAAAAGA--TCTCGGGCTCTCACTT 416062
Query 111621 CTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT 111680
|||| | ||| || || || | || | ||||| | | || | |||||| || |
Sbjct 416061 CTTCTTTACCATGATTTTTACGGAGGTCCAAAAACTCAAATACGTCAGAGTGCCAAGGTT 416002
Query 111681 CAAGATAGACTGCGATAGATCCC-------TTTCGACGCCCAGCTTGATTTACATAGCGC 111733
||||||| | || | || || | | | ||||| |||| ||||| |
Sbjct 416001 CAAGATAAATAGCAAAAGCACCAGGGCGTTTATTGCCGCCC----TGATCCACATATCTG 415946
Query 111734 GCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCC 111793
|| || |||||| || |||||||| ||||| || |||| || |||||||| ||
Sbjct 415945 GCAGTATTGTTAAAGACACGAAGCATGGGAATGATCCCATTAGAGGAGCCATTTGTTCCT 415886
Query 111794 CGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCAC 111853
||| || | | || | | || | || | |||||||||||||| |
Sbjct 415885 GCAATGTAGGAGCCAGTTGCACGGATTCGGTGAACGTTGAGTCCAATACCCCCAGCAGTC 415826
Query 111854 TTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG 111913
|| || || | ||||| | | || || ||||||| || | || ||||||||
Sbjct 415825 TTGGAAATCAGAGCACATGTCTTCAGTGTATCATAGATCCCCTCAATACTATCCTCCTTC 415766
Query 111914 TTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTT 111973
| | ||||||||||| | |||||| ||| ||||| || |||||||| || ||
Sbjct 415765 ATATCAATAAGGAAGCAGGAAGCCATCTGTGGTTGAGGTGTTCCCGCATTGAAAAGTGTG 415706
Query 111974 GGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCA 112033
|| | ||||| | || | |||||||||| || ||||||||| | | ||||
Sbjct 415705 GGAGAAGCGTGGGTAAAAAATTTTTGGGACATCAGGTGGTATGTCTCAATCGCTTTATCA 415646
Query 112034 ATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATG 112093
||||| || || || || | || || ||||| | ||| | ||| || |||
Sbjct 415645 ATGTCCTCATGATGAATACCAACGGCAACGCGCATAATCATATGCTGCGGACGTTCAGCA 415586
Query 112094 AGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 112149
| |||| | || | | | ||||| | |||| || || |||| ||||||||
Sbjct 415585 ACTTTGCCGTTGATTCTTAGTAGATACGACCTCTCCAGTGTCTTGAACCCAAAGTA 415530
Score = 111 bits (122), Expect = 2e-19
Identities = 462/722 (64%), Gaps = 24/722 (3%)
Strand=Plus/Minus
Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767
||||| |||| |||||||| ||||||||||| || || | |||||| |||
Sbjct 417025 TAGATATTTGAGGTGTATGGCTCAAAGCATTCGTTGAAGCCAAGGATTTGGCTGGTACTA 416966
Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTG--ATGCGTT 110825
|| || ||||| || || | | ||||||||| || | ||| | | ||| || ||
Sbjct 416965 GCAGTGGGCATAGGGGCAACAAGAAGACTGTTGCGTACACCGTGTT--TTGCTATTTCTT 416908
Query 110826 CCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883
||| ||| | |||| || | | | || ||| | || |||| |||| ||| ||||
Sbjct 416907 TCTTAAGAGAAACCCAATCCCAAAGGTCAGAA-GGTGTTACGTTCC-ACATATCATACTG 416850
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943
| | || || || | |||||||| ||| | ||||| || | |||| || | |
Sbjct 416849 CAAAATTCCCTGAGAAACAGGAGAACCTTCATATGTTTCGTATGGGCCTTCGGTCTTTGA 416790
Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003
| ||| ||| || ||||| || || || || || |||||||| || |||||
Sbjct 416789 AAGTTCGCAGGATGCAGTCAGGGCGGCATGGTAAATTGTCTCAAAGATCTGAATATTCAG 416730
Query 111004 CTCCTTGGCTTCATCTGAATCAAATG-----CGTAGCGGCACAAAATAAATACATCCGCG 111058
|| ||| || | | || ||||| | ||||| | || || |||| |||
Sbjct 416729 CTGCTTAGCCTGAGAGGAGTCAAAAGGCAAACGTAGAGCCAAGAAGG-----CATCAGCG 416675
Query 111059 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA 111118
|| |||||||| || | | |||| || | || || | ||| |||||| || |
Sbjct 416674 AGTCCTTGAACCCCAAGAGCAATTGGGCGATGACGGAAGTTACTCTTTCGAGCTTCGGGA 416615
Query 111119 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 111178
||||| || || | ||||||| ||||| ||| |||| | |||| |
Sbjct 416614 ACGGGGTAGTGGTTGTTATCAATGATCTTGTTTAAATTGCGCACCACAACTTGGGTGACT 416555
Query 111179 TCATGAAGTTTTTCATAATCAAAAGTGC---GAGTCTCTTCATTGACATACTTTGGAAGG 111235
| || | ||| || | || | || | | | ||| || || |||| |
Sbjct 416554 GCGTGCAATTTACCAAAGTCGTACTCGCCGCGGATAGCGTCA---ACGTATGTTGGCAAA 416498
Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295
|| | |||||| | |||||| || || ||||| | || ||||| | ||||||
Sbjct 416497 GCAAGTGATGCTAGATTGCACACGGCGACTTCATCGGGGGCAGTATACTCAATAATTTCC 416438
Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355
|||||||| || ||||| |||| || || | ||||| ||||| |||||| || ||
Sbjct 416437 GTACATAAATTAGAACTTCTAATAGTTCCAAGGTTCTTCTGGTTGCTCTTCCGATTACAG 416378
Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415
||||||||||| |||||| | || | || ||||| || || | || | ||||| | |
Sbjct 416377 GCATCCTTGTAAAGCATGAAAGGATTTCCAGTCTCGGTTTGAGCTTCCAAGATAGCGTAC 416318
Query 111416 CA 111417
||
Sbjct 416317 CA 416316
>seq6
Length=1499889
Score = 102 bits (112), Expect = 1e-16
Identities = 290/443 (65%), Gaps = 12/443 (3%)
Strand=Plus/Plus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
|| || || || ||||||||||| ||||||||||| || |||| ||||| |||||
Sbjct 77887 TAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGCAAGCGAGATGTTATCCATG 77946
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 122485
||||| ||||| ||| | | ||| || | | || |||| | || |
Sbjct 77947 AAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTG-----CCAAGAGCTACAAGTA 78001
Query 122486 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGT 122545
|| || | || |||| ||||| | | ||||| || |||||||| || | |||
Sbjct 78002 ACCGGTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTTCATGCCAAGGAGAG 78061
Query 122546 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 122605
|||||| || || ||| | ||| ||| ||| || || || || || | | ||| |
Sbjct 78062 CACATGGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCACGGCTTCAATGATGATTG 78121
Query 122606 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACT 122665
| | || ||| | |||| | | || | |||||| ||||| |
Sbjct 78122 CTGCAACAGCTTCTGGGCTGGGACGGTGGCGGAGGTGAGAGAAGAGGAGGCAAGCAAAGT 78181
Query 122666 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGA 122725
| ||| |||||||| || || || || || || || ||||| || || |||||||
Sbjct 78182 CAGTGTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGGCCAGGCATGA 78241
Query 122726 GACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCC 122784
|||| |||||||| ||||| |||||| ||| || || || |||||||||||||||
Sbjct 78242 GACCACGCTTCTTTAACCAGAAAATAGAAGCA-AAAGAACCACTGAAGAAGATACCCTCA 78300
Query 122785 ACACACGCAAACGCAAAAAGGCG 122807
||| || || |||| ||| ||
Sbjct 78301 ACAGCGGCGAAAGCAATAAGACG 78323
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031693834400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |