Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq7 158 1e-33 seq6 149 8e-31 >seq7 Length=1353353 Score = 158 bits (174), Expect = 1e-33 Identities = 623/969 (64%), Gaps = 26/969 (3%) Strand=Plus/Minus Query 117938 TTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTT 117997 |||||||||||||||||| || ||||| || ||||| | || | | | | Sbjct 417269 TTGGGATTGATCGATGAAAGCACCACGATCTGCAGCCATCTGAACAATAGTCCGCTGAGA 417210 Query 117998 GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 118057 |||||||| |||||| |||| ||| || || ||||| ||||||| |||||||| Sbjct 417209 AATTTCCCATACAGTCTTGTAAAGGGCTTTGATGTCATCGGGGATATTGGGAATATTTTG 417150 Query 118058 GATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTT 118117 || || ||||| | || ||| ||| ||||| | | ||||| || |||| | Sbjct 417149 AATTGAGCCACCATCAGCGATGATGCGATTTTTCATGTTGTCAGACCAAAGTCCAAGGTC 417090 Query 118118 TTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGT 118175 ||||| | || || ||| | | ||||| || || || || ||| || Sbjct 417089 AACAAGATCTTTCAGAAGCCATGGGT--TAACAACTTGGAATTCTCCTGCAAGGACTCGC 417032 Query 118176 CTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCT 118235 | ||||||||| | ||||||||||||||||| || ||| || | ||||||| Sbjct 417031 CGAGAATAGATATTTGAGGTGTATGGCTCAAAGCATTCGTTGAAGCCAAGGATTTGGCTG 416972 Query 118236 GTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT-TTTCCCTAAT 118294 || || |||||||| || || | ||||| ||||| || | ||| | ||| ||| | Sbjct 416971 GTACTAGCAGTGGGCATAGGGGCAACAAGAAGACTGTTGCGTACACCGTGTTTTGCTATT 416912 Query 118295 GCGTTCCTTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCA 118352 | ||| || |||| |||| || | | | || || | | | |||||||||| Sbjct 416911 TCTTTC-TTAAGAGAAACCCAATCCCAAAGGTCAGAAG-GTGTTACGTT-CCACATATCA 416855 Query 118353 AACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACC 118412 |||| | || || || || | || || || ||| |||| || |||||||| || | Sbjct 416854 TACTGCAAAATTCCCTGAGAAACAGGAGAACCTTCATATGTTTCGTATGGGCCTTCGGTC 416795 Query 118413 TCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCA 118472 | | | |||| || || ||||| || || || ||||| ||||| || || | Sbjct 416794 TTTGAAAGTTCGCAGGATGCAGTCAGGGCGGCATGGTAAATTGTCTCAAAGATCTGAATA 416735 Query 118473 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG--GCACAAAATAAATACATCCG 118530 |||| ||| |||| ||| ||||| | | || | | || || |||| | Sbjct 416734 TTCAGCTGCTTAGCCTGAGAGGAGTCAAAAGGCAAACGTAGAGCCAAG--AAGGCATCAG 416677 Query 118531 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT 118590 |||| ||||| || || || ||||||||||||| | | ||| ||| ||||| Sbjct 416676 CGAGTCCTTGAACCCCAAGAGCAATTGGGCGATGACGGAAGTTACTCTTTCGAGCTTCGG 416617 Query 118591 CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 118650 ||||| || || |||| || | | | |||| ||| ||||| | |||| Sbjct 416616 GAACGGGGTAGTGGTTGTTATCAATGATCTTGTTTAAATTGCGCACCACAACTTGGGTGA 416557 Query 118651 TTTCATGAAGCTTT------TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAG 118704 | | || | || ||||| || | ||| | | ||| || || | | Sbjct 416556 CTGCGTGCAATTTACCAAAGTCGTACTCG---CCGCGGATAGCGTCA---ACGTATGTTG 416503 Query 118705 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 118764 | | || | ||| || ||||| ||||| | | ||||| |||| ||||| |||| Sbjct 416502 GCAAAGCAAGTGATGCTAGATTGCACACGGCGACTTCATCGGGGGCAGTATACTCAATAA 416443 Query 118765 TTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 118824 ||||||| || || || ||||| |||| || || | |||||| || || ||| | Sbjct 416442 TTTCCGTACATAAATTAGAACTTCTAATAGTTCCAAGGTTCTTCTGGTTGCTCTTCCGAT 416383 Query 118825 TACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 118884 |||| |||||||||||||||||| | || | || ||||| ||||| | | | |||| Sbjct 416382 TACAGGCATCCTTGTAAAGCATGAAAGGATTTCCAGTCTCGGTTTGAGCTTCCAAGATAG 416323 Query 118885 CCTTCCAGA 118893 | | ||||| Sbjct 416322 CGTACCAGA 416314 >seq6 Length=1499889 Score = 149 bits (164), Expect = 8e-31 Identities = 305/448 (68%), Gaps = 4/448 (1%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCAT 129786 || || ||||| |||||||| || ||||| ||||| ||| | |||| ||| || ||||| Sbjct 77887 TAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGC-AAGCGAGATGTTATCCAT 77945 Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCAAA-TTGCTGGCACTCCAATCTGTTTGAGGAGAC 129845 || || ||||||||| | ||||| || || || | |||| | || | | Sbjct 77946 GAAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTG-CCAAGAGCTACAAGTAACC 78004 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 | || | ||| |||| ||||| | ||||| || ||||||||| || | ||| || Sbjct 78005 GGTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTTCATGCCAAGGAGAGCAC 78064 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 |||| || || ||| | ||| | | ||| || ||||| ||||| | ||| || Sbjct 78065 ATGGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCACGGCTTCAATGATGATTGCTG 78124 Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCT 130025 || | || | || || | | ||| | |||||| ||||| || Sbjct 78125 CAACAGCTTCTGGGCTGGGACGGTGGCGGAGGTGAGAGAAGAGGAGGCAAGCAAAGTCAG 78184 Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085 ||| |||||||||||||| ||||| || || || ||||| || || |||||||||| Sbjct 78185 TGTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGGCCAGGCATGAGAC 78244 Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145 | |||||||| ||||||||||| | | ||| || ||| ||||||||| ||||| ||| Sbjct 78245 CACGCTTCTTTAACCAGAAAATAGAAGCAAAAGAACCACTGAAGAAGATACCCTCAACAG 78304 Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAA 130173 ||||| |||| ||||||| ||||| Sbjct 78305 CGGCGAAAGCAATAAGACGCTGTGCAAA 78332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434898512840