Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq7 158 1e-33
seq6 149 8e-31
>seq7
Length=1353353
Score = 158 bits (174), Expect = 1e-33
Identities = 623/969 (64%), Gaps = 26/969 (3%)
Strand=Plus/Minus
Query 117938 TTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTT 117997
|||||||||||||||||| || ||||| || ||||| | || | | | |
Sbjct 417269 TTGGGATTGATCGATGAAAGCACCACGATCTGCAGCCATCTGAACAATAGTCCGCTGAGA 417210
Query 117998 GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 118057
|||||||| |||||| |||| ||| || || ||||| ||||||| ||||||||
Sbjct 417209 AATTTCCCATACAGTCTTGTAAAGGGCTTTGATGTCATCGGGGATATTGGGAATATTTTG 417150
Query 118058 GATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTT 118117
|| || ||||| | || ||| ||| ||||| | | ||||| || |||| |
Sbjct 417149 AATTGAGCCACCATCAGCGATGATGCGATTTTTCATGTTGTCAGACCAAAGTCCAAGGTC 417090
Query 118118 TTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGT 118175
||||| | || || ||| | | ||||| || || || || ||| ||
Sbjct 417089 AACAAGATCTTTCAGAAGCCATGGGT--TAACAACTTGGAATTCTCCTGCAAGGACTCGC 417032
Query 118176 CTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCT 118235
| ||||||||| | ||||||||||||||||| || ||| || | |||||||
Sbjct 417031 CGAGAATAGATATTTGAGGTGTATGGCTCAAAGCATTCGTTGAAGCCAAGGATTTGGCTG 416972
Query 118236 GTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT-TTTCCCTAAT 118294
|| || |||||||| || || | ||||| ||||| || | ||| | ||| ||| |
Sbjct 416971 GTACTAGCAGTGGGCATAGGGGCAACAAGAAGACTGTTGCGTACACCGTGTTTTGCTATT 416912
Query 118295 GCGTTCCTTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCA 118352
| ||| || |||| |||| || | | | || || | | | ||||||||||
Sbjct 416911 TCTTTC-TTAAGAGAAACCCAATCCCAAAGGTCAGAAG-GTGTTACGTT-CCACATATCA 416855
Query 118353 AACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACC 118412
|||| | || || || || | || || || ||| |||| || |||||||| || |
Sbjct 416854 TACTGCAAAATTCCCTGAGAAACAGGAGAACCTTCATATGTTTCGTATGGGCCTTCGGTC 416795
Query 118413 TCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCA 118472
| | | |||| || || ||||| || || || ||||| ||||| || || |
Sbjct 416794 TTTGAAAGTTCGCAGGATGCAGTCAGGGCGGCATGGTAAATTGTCTCAAAGATCTGAATA 416735
Query 118473 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG--GCACAAAATAAATACATCCG 118530
|||| ||| |||| ||| ||||| | | || | | || || |||| |
Sbjct 416734 TTCAGCTGCTTAGCCTGAGAGGAGTCAAAAGGCAAACGTAGAGCCAAG--AAGGCATCAG 416677
Query 118531 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT 118590
|||| ||||| || || || ||||||||||||| | | ||| ||| |||||
Sbjct 416676 CGAGTCCTTGAACCCCAAGAGCAATTGGGCGATGACGGAAGTTACTCTTTCGAGCTTCGG 416617
Query 118591 CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 118650
||||| || || |||| || | | | |||| ||| ||||| | ||||
Sbjct 416616 GAACGGGGTAGTGGTTGTTATCAATGATCTTGTTTAAATTGCGCACCACAACTTGGGTGA 416557
Query 118651 TTTCATGAAGCTTT------TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAG 118704
| | || | || ||||| || | ||| | | ||| || || | |
Sbjct 416556 CTGCGTGCAATTTACCAAAGTCGTACTCG---CCGCGGATAGCGTCA---ACGTATGTTG 416503
Query 118705 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 118764
| | || | ||| || ||||| ||||| | | ||||| |||| ||||| ||||
Sbjct 416502 GCAAAGCAAGTGATGCTAGATTGCACACGGCGACTTCATCGGGGGCAGTATACTCAATAA 416443
Query 118765 TTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 118824
||||||| || || || ||||| |||| || || | |||||| || || ||| |
Sbjct 416442 TTTCCGTACATAAATTAGAACTTCTAATAGTTCCAAGGTTCTTCTGGTTGCTCTTCCGAT 416383
Query 118825 TACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 118884
|||| |||||||||||||||||| | || | || ||||| ||||| | | | ||||
Sbjct 416382 TACAGGCATCCTTGTAAAGCATGAAAGGATTTCCAGTCTCGGTTTGAGCTTCCAAGATAG 416323
Query 118885 CCTTCCAGA 118893
| | |||||
Sbjct 416322 CGTACCAGA 416314
>seq6
Length=1499889
Score = 149 bits (164), Expect = 8e-31
Identities = 305/448 (68%), Gaps = 4/448 (1%)
Strand=Plus/Plus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCAT 129786
|| || ||||| |||||||| || ||||| ||||| ||| | |||| ||| || |||||
Sbjct 77887 TAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGC-AAGCGAGATGTTATCCAT 77945
Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCAAA-TTGCTGGCACTCCAATCTGTTTGAGGAGAC 129845
|| || ||||||||| | ||||| || || || | |||| | || | |
Sbjct 77946 GAAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTG-CCAAGAGCTACAAGTAACC 78004
Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905
| || | ||| |||| ||||| | ||||| || ||||||||| || | ||| ||
Sbjct 78005 GGTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTTCATGCCAAGGAGAGCAC 78064
Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965
|||| || || ||| | ||| | | ||| || ||||| ||||| | ||| ||
Sbjct 78065 ATGGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCACGGCTTCAATGATGATTGCTG 78124
Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCT 130025
|| | || | || || | | ||| | |||||| ||||| ||
Sbjct 78125 CAACAGCTTCTGGGCTGGGACGGTGGCGGAGGTGAGAGAAGAGGAGGCAAGCAAAGTCAG 78184
Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085
||| |||||||||||||| ||||| || || || ||||| || || ||||||||||
Sbjct 78185 TGTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGGCCAGGCATGAGAC 78244
Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145
| |||||||| ||||||||||| | | ||| || ||| ||||||||| ||||| |||
Sbjct 78245 CACGCTTCTTTAACCAGAAAATAGAAGCAAAAGAACCACTGAAGAAGATACCCTCAACAG 78304
Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAA 130173
||||| |||| ||||||| |||||
Sbjct 78305 CGGCGAAAGCAATAAGACGCTGTGCAAA 78332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434898512840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |