Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq7 163 3e-35
seq6 147 3e-30
seq12 91.5 2e-13
>seq7
Length=1353353
Score = 163 bits (180), Expect = 3e-35
Identities = 390/590 (66%), Gaps = 11/590 (2%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| | ||| | |||||||| ||| | ||||||||| || ||||||||| |
Sbjct 415596 CCGCAGCATATGATTATGCGCGTTGCCGTTGGTATTCATCATGAGGACATTGATAAAGCG 415655
Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341
| ||||||||| || |||||||||| | || | ||||| | || || || |||
Sbjct 415656 ATTGAGACATACCACCTGATGTCCCAAAAATTTTTTACCCACGCTTCTCCCACACTTTTC 415715
Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401
||||| || ||||| ||| || ||| | ||||||||||| | | ||||||||
Sbjct 415716 AATGCGGGAACACCTCAACCACAGATGGCTTCCTGCTTCCTTATTGATATGAAGGAGGAT 415775
Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461
|| | || ||||||| || || | | ||||| | || || ||| ||||||
Sbjct 415776 AGTATTGAGGGGATCTATGATACACTGAAGACATGTGCTCTGATTTCCAAGACTGCTGGG 415835
Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 104521
|||||||| | || | || | | || | | || ||| || ||||||
Sbjct 415836 GGTATTGGACTCAACGTTCACCGAATCCGTGCAACTGGCTCCTACATTGCAGGAACAAAT 415895
Query 104522 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 104581
|| || |||| || ||||| |||||||| || |||||| || || | |||||
Sbjct 415896 GGCTCCTCTAATGGGATCATTCCCATGCTTCGTGTCTTTAACAATACTGCCAGATATGTG 415955
Query 104582 AATCAAGCTGGGCGTCGAAA-------GGGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634
|||| ||||| | | | || || | || | |||||||| || |||||
Sbjct 415956 GATCA----GGGCGGCAATAAACGCCCTGGTGCTTTTGCTATTTATCTTGAACCTTGGCA 416011
Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694
| | || | | ||||| | || | ||| || || ||| | || || | | |
Sbjct 416012 CTCTGACGTATTTGAGTTTTTGGACCTCCGTAAAAATCATGGTAAAGAAGAAGTGAGAGC 416071
Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754
||| ||||| ||| ||| ||||||| ||| || | |||||||| | |||||| |||
Sbjct 416072 CCGAGATCTTTTCCTCGCCCTCTGGACTCCCGACTTGTTCATGAAACGGGTTGAGAAGAA 416131
Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATG 104804
|||| ||||| | || || |||||| || ||||| |||| ||| ||||||
Sbjct 416132 TGGCGATTGGACACTATTCTGTCCAAACGAGGCATCTGGACTCGCCGATG 416181
Score = 104 bits (114), Expect = 3e-17
Identities = 596/947 (63%), Gaps = 36/947 (4%)
Strand=Plus/Plus
Query 104907 CTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTA 104966
|||||||||||||||| | || | |||||||||||| || |||||||| | ||||| |
Sbjct 416335 CTCAAACCGAGACTGGAAATCCTTTCATGCTTTACAAGGATGCCTGTAATCGGAAGAGCA 416394
Query 104967 ATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTA 105026
| || ||||| | || || | ||||| ||| | ||||| ||||| | || | ||
Sbjct 416395 ACCAGAAGAACCTTGGAACTATTAGAAGTTCTAATTTATGTACGGAAATTATTGAGTATA 416454
Query 105027 CAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGG 105086
| | | ||||| || ||||| || || |||||| | ||| | || | || || |
Sbjct 416455 CTGCCCCCGATGAAGTCGCCGTGTGCAATCTAGCATCACTTGCTTTGCCAACATACGTTG 416514
Query 105087 -----ATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGT 105141
|||| | | | | || || | || ||| | |||| ||| || || |||
Sbjct 416515 ACGCTATCC-GCGGCGAGTAC----GACTTTGGTAAATTGCACGCAGTCACCCAAGTTGT 416569
Query 105142 CACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAA 105201
|| |||||| | ||||||| || ||||||||| ||||| ||
Sbjct 416570 GGTGCGCAATTTAAACAAGATCATTGATAACAACCACTACCCCGTTCCCGAAGCTCGAAA 416629
Query 105202 ATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT 105261
||| | | || || ||||||| ||| || ||||| || ||||| |||| |||
Sbjct 416630 GAGTAACTTCCGTCATCGCCCAATTGCTCTTGGGGTTCAAGGACTCGCTGATGCCTTC-- 416687
Query 105262 TCTTTGTCGCCACG-----CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATA 105316
||| | | ||| | ||||| ||| | || ||| | | ||| | ||
Sbjct 416688 ---TTGGCTCTACGTTTGCCTTTTGACTCCTCTCAGGCTAAGCAGCTGAATATTCAGATC 416744
Query 105317 TTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGT 105376
|||||||| || || || ||||| || || | || | || || || ||
Sbjct 416745 TTTGAGACAATTTACCATGCCGCCCTGACTGCATCCTGCGAACTTTCAAAGACCGAAGGC 416804
Query 105377 CCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGG 105436
||||| ||||| | ||| |||||||| | ||| || || | | || | |||||||| |
Sbjct 416805 CCATACGAAACATATGAAGGTTCTCCTGTTTCTCAGGGAATTTTGCAGTATGATATGT-G 416863
Query 105437 GAAGGTGAGACC----AAGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCAT--CAAG 105490
||| || | ||| | ||| | || |||| |||| ||| || || |||
Sbjct 416864 GAACGTAACACCTTCTGACCTT---TGGGATTGGGTTTCTCTTAAGAAAGAAATAGCAA- 416919
Query 105491 GAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAA 105550
| | ||| | || |||||||| || | || || ||||| || || ||| |||
Sbjct 416920 -AACACGGTGTACGCAACAGTCTTCTTGTTGCCCCTATGCCCACTGCTAGTACCAGCCAA 416978
Query 105551 ATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACC 105610
||| | || || ||||||||||| || ||||| | || |||||| | || |
Sbjct 416979 ATCCTTGGCTTCAACGAATGCTTTGAGCCATACACCTCAAATATCTATTCTCGGCGAGTC 417038
Query 105611 CTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT--CTCGTGGATGACCTCAAAGAGATTG 105668
|| || ||||| || |||| ||| ||| || || | || || || |||
Sbjct 417039 CTTGCAGGAGAATTCCAAGTTGTTAAC--CCATGGCTTCTGAAAGATCTTGTTGACCTTG 417096
Query 105669 GTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATA 105728
| || ||||| | | ||||| ||| ||| | | ||||| || ||||||||||
Sbjct 417097 GACTTTGGTCTGACAACATGAAAAATCGCATCATCGCTGATGGTGGCTCAATTCAAAATA 417156
Query 105729 TTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGA 105788
|| |||| || |||| || || | ||| || || |||||||| |
Sbjct 417157 TTCCCAATATCCCCGATGACATCAAAGCCCTTTACAAGACTGTATGGGAAATTTCTCAGC 417216
Query 105789 AGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAA 105835
| | | || | ||||| |||||||||||| ||||| ||||||
Sbjct 417217 GGACTATTGTTCAGATGGCTGCAGATCGTGGTGCTTTCATCGATCAA 417263
>seq6
Length=1499889
Score = 147 bits (162), Expect = 3e-30
Identities = 348/518 (67%), Gaps = 16/518 (3%)
Strand=Plus/Minus
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCG 94793
|||||| || |||| |||||||| || |||||||| | | | ||| || | | |
Sbjct 78396 AGTTCCTTGCATTCGCAAGAAAGCCGACTGGGCTAT----TCGATGGATCCAGGATAGTG 78341
Query 94794 T-TCC---TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849
||| ||||| |||| || | || || || ||||||||||||||||||| ||
Sbjct 78340 AATCCACATTTGCACAGCGTCTTATTGCTTTCGCCGCTGTTGAGGGTATCTTCTTCAGTG 78281
Query 94850 GTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTC 94908
|||| || ||| |||||| ||| | |||||||| ||||||||||| || || |||
Sbjct 78280 GTTCTTT-TGCTTCTATTTTCTGGTTAAAGAAGCGTGGTCTCATGCCTGGCCTTACTTTC 78222
Query 94909 TCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTC 94968
||||||||||| ||||||||||||||||| || ||| || ||||| || |||
Sbjct 78221 TCCAACGAGCTGATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCTTGCCTCCTCTTC 78162
Query 94969 AAATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTT 95028
| || || | | || || || | || | | ||||||||
Sbjct 78161 TCTCACCTCCGCCACCGTCCCAGCCCAGAAGCTGTTGCAGCAATCATCATTGAAGCCGTG 78102
Query 95029 GAGATTGAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCT 95088
|| || ||| ||| |||| || |||||| |||||||| |||||| | || ||||| ||
Sbjct 78101 GAAATCGAGCAAGAATTCTTAACGGATGCTCTTCCATGTGCTCTCCTTGGCATGAACTCC 78042
Query 95089 GAAAAAATGTCTGAATATATTGAGTATGTATCTGATAGATT-GTTGAAGCAGATCGGGGT 95147
| |||| |||| || |||| ||| | || | || ||| ||| || ||
Sbjct 78041 AAGTTGATGTGCCAATACATCGAGTTCGTAGCCGACCGGTTACTTGTAGC---TCTTGGC 77985
Query 95148 GCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGAC 95205
| || || ||||||| ||| ||||| ||||||||||| ||||| || | |
Sbjct 77984 AACAAGAAACATTATAACTCCACGAACCCATTCGACTTCATGGATAACATCTCGCTTGCC 77925
Query 95206 GGGAAGACAAACTTCTTCGAAAAGAGGGTTGGGGACTA 95243
|| ||||| ||||| || || ||| | ||||| || ||
Sbjct 77924 GGCAAGACCAACTTTTTTGAGAAGCGTGTTGGCGATTA 77887
>seq12
Length=982140
Score = 91.5 bits (100), Expect = 2e-13
Identities = 165/237 (70%), Gaps = 6/237 (3%)
Strand=Plus/Minus
Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 9753
||| || | |||||| || || |||||||||| ||||| || |||| || |||
Sbjct 522009 CTTGCCAATGGCATCGATTTCGTCAATGAAGATTATGCAAGGAGTGTTTTTTCGCGCGTT 521950
Query 9754 TTCAAAGAGATCCCGTACACGCT-TGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9812
| | || ||||| || ||||| |||| || |||||||||||||| ||||| || | ||
Sbjct 521949 TGCGAAAAGATCACGAACACGAGATGGC-CCAACACCAACAAACATTTCCACGAACTCTG 521891
Query 9813 --CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAG 9870
| || || | || || || || ||| || || || |||| || || ||
Sbjct 521890 AACCGCTGACGCT--GAAAAATGGAACGCCAGACTCGCCGGCTGTGGCCTTCGCTAGTAG 521833
Query 9871 AGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
|||||||| |||||||| || | ||||| ||||| || |||||||| |||||
Sbjct 521832 TGTCTTACCGGTACCTGGTGGGCCAGAGAGGATAGCACCGCGGGGAATCTTAGCGCC 521776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260515660360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |