Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq6 127 2e-24 seq7 87.8 2e-12 >seq6 Length=1499889 Score = 127 bits (140), Expect = 2e-24 Identities = 117/148 (79%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 59971 CATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGT 60030 |||||||||| ||||| || ||||| || || || || ||||||||| ||| || | Sbjct 78334 CATTTGCACAGCGTCTTATTGCTTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGTTCTT 78275 Query 60031 TCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACG 60090 | | ||||||||||| | || |||||||| |||||||| ||||| | ||||||||||| Sbjct 78274 TTGCTTCTATTTTCTGGTTAAAGAAGCGTGGTCTCATGCCTGGCCTTACTTTCTCCAACG 78215 Query 60091 AGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||| || || |||||||| || || Sbjct 78214 AGCTGATCTCTCGTGACGAGGGTCTTCA 78187 >seq7 Length=1353353 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/154 (73%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 79054 AGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTG 79113 || ||||| || ||||||||||| || || ||| || | ||| || ||||| || Sbjct 416494 AGTGATGCTAGATTGCACACGGCGACTTCATCGGGGGCAGTATACTCAATAATTTCCGTA 416435 Query 79114 CACAAATTAGACGACTTG--ATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGG 79171 || |||||||| |||| || || || | ||||||||||||||||||| ||||||| Sbjct 416434 CATAAATTAGA--ACTTCTAATAGTTCCAAGGTTCTTCTGGTTGCTCTTCCGATTACAGG 416377 Query 79172 CGTCCTTGTAGCACATGTACGGCGTCCCGGTCTC 79205 | |||||||| |||| | || | || ||||| Sbjct 416376 CATCCTTGTAAAGCATGAAAGGATTTCCAGTCTC 416343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524532594160