Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq9 179 4e-40
seq5 147 2e-30
seq6 120 3e-22
seq2 107 2e-18
>seq9
Length=1275601
Score = 179 bits (198), Expect = 4e-40
Identities = 170/217 (78%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 27416 TTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTG 27475
|||||||||| ||||| |||||||||||||| |||||||| ||||| ||||| ||| |
Sbjct 1015200 TTGTCAAGACTCTTACTGGCAAGACTATTACCCTTGAGGTCGAGTCTTCTGATACCATCG 1015259
Query 27476 CAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAA 27535
||| |||| | || || |||||||| || || || || || |||||||| || | |
Sbjct 1015260 ACAATGTGAAAACCAAGATCCAGGACAAAGAAGGCATCCCCCCCGACCAGCAACGATTGA 1015319
Query 27536 TTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGG 27595
| || |||||||| ||||||||||||| ||| ||||| | || || || | || ||||
Sbjct 1015320 TCTTCGCTGGTAAACAACTCGAGGATGGTCGCACCCTCTCGGATTACAACATTCAGAAGG 1015379
Query 27596 AATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| || || ||| | ||||||||||||||
Sbjct 1015380 AGTCCACTCTCCACCTTGTCCTTCGTCTTCGCGGTGG 1015416
Score = 152 bits (168), Expect = 6e-32
Identities = 150/194 (77%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| ||||| |||||||| || || |||||||| || || |||||||| |||||
Sbjct 1014900 ATTATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGTCC 1014959
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
| |||| ||||| ||| | ||| |||| || || ||||||||||| || |||||||||
Sbjct 1014960 AGCGATACCATTGATAATGTTAAGACTAAGATCCAAGACAAGGAGGGCATCCCTCCAGAC 1015019
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|| || || | ||||| |||||||| || || || |||| || ||||| | |||||
Sbjct 1015020 CAACAACGCTTGATTTTCGCTGGTAAACAGCTTGAAGATGGCCGCACCCTCTCCGACTAC 1015079
Query 27583 AATGTCCAAAAGGA 27596
|| |||| |||||
Sbjct 1015080 AACATCCAGAAGGA 1015093
Score = 141 bits (156), Expect = 1e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || |||||||| || |||||||||||||| || || | || ||||| ||
Sbjct 1015646 ATGCAGATTTTTGTCAAAACACTTACCGGCAAGACCATCACATTAGAAGTTGAATCTTCG 1015705
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||| | ||||||||||| ||||| || ||||| || |||||
Sbjct 1015706 GACACGATTGACAATGTCAAGACAAAAATTCAGGATAAGGAAGGTATTCCACCCGACCAA 1015765
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || ||||| || |||||||| || |||| ||||| || ||||||| |||
Sbjct 1015766 CAGCGCCTCATCTTTGCCGGCAAGCAACTTGAAGATGGCCGTACGCTTTCAGACTACAAT 1015825
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
|||| || || |||||| ||
Sbjct 1015826 ATCCAGAAAGAGAGCACTCTGCA 1015848
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || || || | ||||| || || || || | || |||||||| |
Sbjct 1015418 ATGCAAATTTTCGTAAAAACCTTAACCGGAAAAACAATCACATTAGAAGTTGAGTCTTCT 1015477
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | || | || | || ||||| || || || || || || |||||||||
Sbjct 1015478 GATACGATCGACAACGTCAAAACAAAGATTCAAGATAAAGAAGGTATCCCACCAGACCAG 1015537
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| || ||||| || || ||||| ||||||||||| | || || || | || || ||
Sbjct 1015538 CAACGCCTAATCTTCGCCGGTAAACAACTCGAGGACGGCCGCACACTGTCTGATTACAAC 1015597
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||||| || || || || || || || ||||| | ||||||||
Sbjct 1015598 ATCCAAAAAGAGTCTACCCTCCACCTTGTTTTGCGGTTGCGCGGTGG 1015644
>seq5
Length=1732373
Score = 147 bits (162), Expect = 2e-30
Identities = 144/183 (79%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| || ||||| || ||||||||||| || ||||||||||| ||||| | |||| ||
Sbjct 840273 CTTCGTTAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCGAGCGATACAAT 840214
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
|| ||| | ||| || ||||||||||||||||| ||||| |||||||| ||||| |
Sbjct 840213 TGATAATGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCGCCAGACCAACAGCGATT 840154
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592
||||| || || ||||| || ||||||| ||| || | ||| || |||||| ||||||
Sbjct 840153 GATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTTTGAGC-GATTATAATATCCAAA 840095
Query 27593 AGG 27595
|||
Sbjct 840094 AGG 840092
>seq6
Length=1499889
Score = 120 bits (132), Expect = 3e-22
Identities = 340/512 (66%), Gaps = 28/512 (5%)
Strand=Plus/Minus
Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGT 64719
|| || || || ||||| || || ||||| | || ||| || | |||| ||||||
Sbjct 78380 AAGAAAGCCGACTGGGCTATTCGATGGATCCAGGATAGTGAATCCACATTTGCACAGCGT 78321
Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779
|| ||||| ||| ||| || || || ||||| ||| || || ||||||||||
Sbjct 78320 CTTATTGCTTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGTTCTTTTGCTTCTATTTTC 78261
Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839
||| |||| ||||| || || ||||| || || | || || |||||||||||||||||
Sbjct 78260 TGGTTAAAGAAGCGTGGTCTCATGCCTGGCCTTACTTTCTCCAACGAGCTGATCTCTCGT 78201
Query 64840 GACGAGGGGCTCCACCAAGAATTTGCGGTTAC--CCTGTTCAGCCACCTCAAGGACAAAC 64897
|||||||| || ||| || ||||| || | ||| ||| |||||| | | ||
Sbjct 78200 GACGAGGGTCTTCACACTGACTTTGC--TTGCCTCCTCTTCTCTCACCTC--CGCC--AC 78147
Query 64898 CATCACATGGGACTATAA-TTGATATAGTAA-AATC-----GGCTGTAGAAATTGAAAAG 64950
| || || | | | || || | || || ||| || || ||||| || |
Sbjct 78146 CGTCCCA---GCCCAGAAGCTGTTGCAGCAATCATCATTGAAGCCGTGGAAATCGAGCAA 78090
Query 64951 GAATTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAA 65010
|||||| | || | || ||||| ||| |||| | |||||| | || | ||||
Sbjct 78089 GAATTCTTAACGGATGCTCTTCCATGTGCTCTCCTTGGCATGAACTCCAAGTTGATGTGC 78030
Query 65011 CAGTATATCGAATTTGTAGCAGATCGCCTGCTT---ACTCAGTTTGGTATTAAGCCCTAC 65067
|| || ||||| || ||||| || || | ||| ||| |||| | ||| |
Sbjct 78029 CAATACATCGAGTTCGTAGCCGACCGGTTACTTGTAGCTC---TTGGCAACAAGAAACAT 77973
Query 65068 TGGAATTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAAC 65127
| || || | || ||||| |||| ||||| | ||| || | || ||||| |||
Sbjct 77972 TATAACTCCACGAACCCATTCGACTTCATGGATAACATCTCGCTTGCCGGCAAGACCAAC 77913
Query 65128 TTTTTTGAAAAGAGGGTAGGTGATTACTCAAA 65159
|||||||| ||| | || || |||||| ||||
Sbjct 77912 TTTTTTGAGAAGCGTGTTGGCGATTAC-CAAA 77882
>seq2
Length=1931404
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||| || || || |||||||||||||| ||||| || || || || || |||
Sbjct 802102 GACAAGGAGGGCATCCCCCCTGACCAGCAGCGTCTGATTTTCGCCGGCAAACAGCTGGAG 802161
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||| || ||||| | ||||| || |||| ||||| ||||| ||||| || ||| |
Sbjct 802162 GATGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCCACCCTTCACCTTGTCCTC 802221
Query 27619 CGTCTTCGCGGTGG 27632
|| || || |||||
Sbjct 802222 CGCCTCCGTGGTGG 802235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310121973680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |