Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq9 118 7e-22
>seq9
Length=1275601
Score = 118 bits (130), Expect = 7e-22
Identities = 156/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553
||| ||||| || ||||||||||| || || || || || |||||||| || || | ||
Sbjct 1015858 CAAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAGTCTGAAAGCGTACGGCCATC 1015799
Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613
||||||||| || |||||||| || | ||||||||||| || || | || ||||| ||
Sbjct 1015798 TTCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGAATACCTTCCTTATC 1015739
Query 34614 TGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672
||| |||||| || || | ||| ||||| || ||||| | || || |
Sbjct 1015738 -CTGAATTTTTGTCTTGACATTGTCAATCGTGTCCGAAGATTCAACTTCTAATGTGATGG 1015680
Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || ||||| | ||||| ||||||||||||||
Sbjct 1015679 TCTTGCCGGTAAGTGTTTTGACAAAAATCTGCAT 1015646
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | || || | ||||| ||||| || |||||||| || ||||| || || ||
Sbjct 1015129 CCGCCACGGAGGCGGAGGACCAAGTGGAGGGTACTCTCCTTCTGGATGTTGTAGTCGGAG 1015070
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | |||||||| |||||||| || || || || || |||||||| || ||
Sbjct 1015069 AGGGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAAATCAAGCGTTGTTGGTCTGGAGGG 1015010
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| |||||||||||| |||| || || ||||| || ||| || || | ||| ||
Sbjct 1015009 ATGCCCTCCTTGTCTTGGATC-TTAGTCTTAACATTATCAATGGTATCGCTGGACTCGAC 1014951
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | ||| || || || || || | || || || || ||||||||
Sbjct 1014950 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 1014903
Score = 107 bits (118), Expect = 1e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCG 34551
||||| || | ||||| || ||| ||||| ||||| ||||| || ||||| || ||
Sbjct 1015632 CGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGACAGTGTGCGGCCG 1015573
Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611
|| || |||||||||||||| || |||| || || ||||| || || | || || ||
Sbjct 1015572 TCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGGATACCTTCTTTA 1015513
Query 34612 TCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTAT 34670
||| ||| |||||||| ||| | || || || ||| ||||| | || ||
Sbjct 1015512 TCT-TGAATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAACTTCTAATGTGAT 1015454
Query 34671 CGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| |||||||| ||||| || ||||| |||||
Sbjct 1015453 TGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418
Score = 84.2 bits (92), Expect = 1e-11
Identities = 111/153 (73%), Gaps = 1/153 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | || | ||||||||| |||||| |||||||| ||||| ||
Sbjct 1015416 CCACCGCGAAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAATCCGAG 1015357
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || || ||||||||||| || || || || || || ||||| || ||
Sbjct 1015356 AGGGTGCGACCATCCTCGAGTTGTTTACCAGCGAAGATCAATCGTTGCTGGTCGGGGGGG 1015297
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC 34632
| || || ||||| |||| || ||||| ||
Sbjct 1015296 ATGCCTTCTTTGTCCTGGATC-TTGGTTTTCAC 1015265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729450405087
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |