Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq9 131 1e-25 >seq9 Length=1275601 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || |||||||| | ||||| || | || || | ||||| || | || Sbjct 1015418 ATGCAAATTTTCGTAAAAACCTTAACCGGAAAAACAATCACATTAGAAGTTGAGTCTTCT 1015477 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | |||||| ||| |||||||| |||||||| || ||||| || || Sbjct 1015478 GATACGATCGACAACGTCAAAACAAAGATTCAAGATAAAGAAGGTATCCCACCAGACCAG 1015537 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || |||| | |||||| |||||| | || ||| | || | || ||||||||| Sbjct 1015538 CAACGCCTAATCTTCGCCGGTAAACAACTCGAGGACGGCCGCACACTGTCTGATTACAAC 1015597 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||| ||||| ||| | || | |||||||| ||||| ||||| || Sbjct 1015598 ATCCAAAAAGAGTCTACCCTCCACCTTGTTTTGCGGTTGCGCGGTGGTAT 1015647 Score = 113 bits (124), Expect = 4e-20 Identities = 157/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 26998 TTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTG 27057 |||| || ||||| || |||||| ||||||| ||||| || || | || || | || | Sbjct 1015200 TTGTCAAGACTCTTACTGGCAAGACTATTACCCTTGAGGTCGAGTCTTCTGATACCATCG 1015259 Query 27058 AGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAA 27117 | | || ||| || || || |||||||||||||| || ||||| || || || || | Sbjct 1015260 ACAATGTGAAAACCAAGATCCAGGACAAAGAAGGCATCCCCCCCGACCAGCAACGATTGA 1015319 Query 27118 TATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGG 27177 | | ||| || |||||| | || || || ||| | || |||||||||||||| |||| Sbjct 1015320 TCTTCGCTGGTAAACAACTCGAGGATGGTCGCACCCTCTCGGATTACAACATTCAGAAGG 1015379 Query 27178 AGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||| || | || | || | ||| | || ||||| || Sbjct 1015380 AGTCCACTCTCCACCTTGTCCTTCGTCTTCGCGGTGGTAT 1015419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918187977280