Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq9 107 1e-18
>seq9
Length=1275601
Score = 107 bits (118), Expect = 1e-18
Identities = 168/232 (72%), Gaps = 10/232 (4%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||| |||||||| ||||| ||||| || || || ||| | || || ||| |
Sbjct 1015646 ATGCAGATTTTTGTCAAAACACTTACCGGCAAGACCATCACATTAGAAGTTGAATCTTCG 1015705
Query 27850 GAC--GATGTACAATCGGTCAA-ACAAAAAAT-AGCCGACAAAGAAGGTGTTCCGATGGA 27905
||| ||| ||||| ||||| ||||||| | || || || |||||| |||| ||
Sbjct 1015706 GACACGATTGACAAT--GTCAAGACAAAAATTCAG--GATAAGGAAGGTATTCCACCCGA 1015761
Query 27906 GCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCA-GCTTGTCCGATT 27964
|| || || | || |||||||| || ||| | || || | || | |||| || || |
Sbjct 1015762 CCAACAGCGCCTCATCTTTGCCGGCAAGCAACTTGAAGATGGCCGTACGCTT-TCAGACT 1015820
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||| ||||| |||||||||||| |||| ||||||||| | |||||||| ||
Sbjct 1015821 ACAATATCCAGAAAGAGAGCACTCTGCACTTGGTTTTGAGATTGCGTGGAGG 1015872
Score = 96.9 bits (106), Expect = 2e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||||||||| || ||||| | || || ||| || ||| | || || || |
Sbjct 1015418 ATGCAAATTTTCGTAAAAACCTTAACCGGAAAAACAATCACATTAGAAGTTGAGTCTTCT 1015477
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| |||| |||| |||||| ||| || || ||||||||| | || || |
Sbjct 1015478 GATACGATCGACAAC--GTCAAAACAAAGATTCAAGATAAAGAAGGTATCCCACCAGACC 1015535
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
||||||| |||| || ||||| |||||| | || |||| |||| |||| |||||||
Sbjct 1015536 AGCAACGCCTAATCTTCGCCGGTAAACAACTCGAGGACGGCCGCACACTGTCTGATTACA 1015595
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||||||| || | || | |||||||| ||||| || ||
Sbjct 1015596 ACATCCAAAAAGAGTCTACCCTCCACCTTGTTTTGCGGTTGCGCGGTGG 1015644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355862230854153
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |