Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq9 165 2e-35
seq2 111 4e-19
seq5 104 5e-17
seq7 89.7 1e-12
>seq9
Length=1275601
Score = 165 bits (182), Expect = 2e-35
Identities = 163/211 (77%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | ||||||||||| ||||||||||| || || ||||| ||||||| |||||
Sbjct 1015410 CGAAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAATCCGAGAGGGTG 1015351
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||| || || || || || |||||||| | ||||| ||||| || || | |||
Sbjct 1015350 CGACCATCCTCGAGTTGTTTACCAGCGAAGATCAATCGTTGCTGGTCGGGGGGGATGCCT 1015291
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|| |||||||||||||| |||||| || |||||||| ||||| || ||||| ||
Sbjct 1015290 TCTTTGTCCTGGATCTTGGTTTTCACATTGTCGATGGTATCAGAAGACTCGACCTCAAGG 1015231
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104
|| || ||||| || || |||||||| ||||
Sbjct 1015230 GTAATAGTCTTGCCAGTAAGAGTCTTGACAA 1015200
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
|||||||| || || ||||||||||||||||| ||||| | || || | || || ||
Sbjct 1015626 ACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGACAGTGTGCGGCCGTCCTCG 1015567
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025
|| || || || |||||||| |||||||| ||||| || || | ||||| || || ||
Sbjct 1015566 AGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGA 1015507
Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085
|||||| ||| ||||| ||||| || ||||| ||||| || | ||||| || |||
Sbjct 1015506 ATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAACTTCTAATGTGATTGTTTTT 1015447
Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || | || ||||| || | |||||
Sbjct 1015446 CCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||| || || ||| || |||||||| || || | ||||| | ||||||
Sbjct 1015114 AGGACCAAGTGGAGGGTACTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 1015055
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||| || || ||||| || | |||||||||||| ||||| | || ||||||||
Sbjct 1015054 TCAAGCTGTTTACCAGCGAAAATCAAGCGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCT 1014995
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || ||||| || | || ||||| || ||||| |||
Sbjct 1014994 TGGATCTTAGTCTTAACATTATCAATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTC 1014935
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| || || | ||||||
Sbjct 1014934 TTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 1014903
>seq2
Length=1931404
Score = 111 bits (122), Expect = 4e-19
Identities = 96/119 (81%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||||||||| |||||||| || |||||||| || |||| ||||| | |||||
Sbjct 802220 AGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCC 802161
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|||||||| ||||| ||||| || || || || |||||||| || | || ||||||||
Sbjct 802160 TCCAGCTGTTTGCCGGCGAAAATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 802102
>seq5
Length=1732373
Score = 104 bits (114), Expect = 5e-17
Identities = 135/183 (74%), Gaps = 8/183 (4%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985
|||||||| |||||||| | ||| | | | ||||| || |||||||| || ||||| ||
Sbjct 840094 TTTTGGATATTATAATCGCTCAAAG-TGCGACCATCCTCAAGCTGCTTTCCGGCGAAAAT 840152
Query 210986 AAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTC 211045
| || |||||||| || |||| || ||||||||||| ||||| || || || ||
Sbjct 840153 CAATCGCTGTTGGTCTGGCGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTATC 840212
Query 211046 GATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102
|| || || ||| || ||||| |||||||| ||||| || ||||| ||||| ||
Sbjct 840213 AATTGTATC---GCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTAAC 840269
Query 211103 AAA 211105
||
Sbjct 840270 GAA 840272
>seq7
Length=1353353
Score = 89.7 bits (98), Expect = 1e-12
Identities = 112/154 (73%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 178229 TACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATCGAGACCGGGAGCCTCA 178288
|||| || ||| |||| ||||||||| ||| |||||||| |||| || | |||||
Sbjct 416218 TACTGTTCGTATAGCTGCTCGAATTCGTCTCCGTAGACATCGGCGAGTCCAGATGCCTCG 416159
Query 178289 TTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTTCATGAAGAGGTCAGAG 178348
|| || ||||| || |||| | || | | || || ||||||||||| | ||| |
Sbjct 416158 TTTGGACAGAATAGTGTCCAATCGCCATTCTTCTCAACCCGTTTCATGAACAAGTCGGGA 416099
Query 178349 GTCCAGATGGCATAGAAAATCTCTCTGGCTCTCA 178382
||||||| ||| ||||| |||| ||||||||
Sbjct 416098 GTCCAGAGGGCGAGGAAAAGATCTCGGGCTCTCA 416065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151420786235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |