Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq9 165 2e-35 seq2 111 4e-19 seq5 104 5e-17 seq7 89.7 1e-12 >seq9 Length=1275601 Score = 165 bits (182), Expect = 2e-35 Identities = 163/211 (77%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||||||||| ||||||||||| || || ||||| ||||||| ||||| Sbjct 1015410 CGAAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAATCCGAGAGGGTG 1015351 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| || || || || || |||||||| | ||||| ||||| || || | ||| Sbjct 1015350 CGACCATCCTCGAGTTGTTTACCAGCGAAGATCAATCGTTGCTGGTCGGGGGGGATGCCT 1015291 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || |||||||||||||| |||||| || |||||||| ||||| || ||||| || Sbjct 1015290 TCTTTGTCCTGGATCTTGGTTTTCACATTGTCGATGGTATCAGAAGACTCGACCTCAAGG 1015231 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104 || || ||||| || || |||||||| |||| Sbjct 1015230 GTAATAGTCTTGCCAGTAAGAGTCTTGACAA 1015200 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 |||||||| || || ||||||||||||||||| ||||| | || || | || || || Sbjct 1015626 ACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGACAGTGTGCGGCCGTCCTCG 1015567 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 || || || || |||||||| |||||||| ||||| || || | ||||| || || || Sbjct 1015566 AGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGA 1015507 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 |||||| ||| ||||| ||||| || ||||| ||||| || | ||||| || ||| Sbjct 1015506 ATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAACTTCTAATGTGATTGTTTTT 1015447 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || | || ||||| || | ||||| Sbjct 1015446 CCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || || ||| || |||||||| || || | ||||| | |||||| Sbjct 1015114 AGGACCAAGTGGAGGGTACTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 1015055 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| || || ||||| || | |||||||||||| ||||| | || |||||||| Sbjct 1015054 TCAAGCTGTTTACCAGCGAAAATCAAGCGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCT 1014995 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || ||||| || | || ||||| || ||||| ||| Sbjct 1014994 TGGATCTTAGTCTTAACATTATCAATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTC 1014935 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 1014934 TTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 1014903 >seq2 Length=1931404 Score = 111 bits (122), Expect = 4e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| |||||||| || |||||||| || |||| ||||| | ||||| Sbjct 802220 AGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCC 802161 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 |||||||| ||||| ||||| || || || || |||||||| || | || |||||||| Sbjct 802160 TCCAGCTGTTTGCCGGCGAAAATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 802102 >seq5 Length=1732373 Score = 104 bits (114), Expect = 5e-17 Identities = 135/183 (74%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985 |||||||| |||||||| | ||| | | | ||||| || |||||||| || ||||| || Sbjct 840094 TTTTGGATATTATAATCGCTCAAAG-TGCGACCATCCTCAAGCTGCTTTCCGGCGAAAAT 840152 Query 210986 AAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTC 211045 | || |||||||| || |||| || ||||||||||| ||||| || || || || Sbjct 840153 CAATCGCTGTTGGTCTGGCGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTATC 840212 Query 211046 GATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 || || || ||| || ||||| |||||||| ||||| || ||||| ||||| || Sbjct 840213 AATTGTATC---GCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTAAC 840269 Query 211103 AAA 211105 || Sbjct 840270 GAA 840272 >seq7 Length=1353353 Score = 89.7 bits (98), Expect = 1e-12 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 178229 TACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATCGAGACCGGGAGCCTCA 178288 |||| || ||| |||| ||||||||| ||| |||||||| |||| || | ||||| Sbjct 416218 TACTGTTCGTATAGCTGCTCGAATTCGTCTCCGTAGACATCGGCGAGTCCAGATGCCTCG 416159 Query 178289 TTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTTCATGAAGAGGTCAGAG 178348 || || ||||| || |||| | || | | || || ||||||||||| | ||| | Sbjct 416158 TTTGGACAGAATAGTGTCCAATCGCCATTCTTCTCAACCCGTTTCATGAACAAGTCGGGA 416099 Query 178349 GTCCAGATGGCATAGAAAATCTCTCTGGCTCTCA 178382 ||||||| ||| ||||| |||| |||||||| Sbjct 416098 GTCCAGAGGGCGAGGAAAAGATCTCGGGCTCTCA 416065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151420786235