Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq9 89.7 4e-13 >seq9 Length=1275601 Score = 89.7 bits (98), Expect = 4e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 39073 AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCA 39132 || ||||| || || ||||||||||| || ||||| || || | ||| || || | || Sbjct 1015857 AAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAGTCTGAAAGCGTACGGCCATCT 1015798 Query 39133 TCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192 ||||| || ||||| ||||| || || ||||| ||||||| || | | || || ||| Sbjct 1015797 TCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGAATACCTTCCTTATCC 1015738 Query 39193 ATGATTTTCTGT-TTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACT 39251 ||| ||| ||| |||| | | | ||| || || || || || | ||||| | Sbjct 1015737 -TGAATTTTTGTCTTGACATTGTCAATCGTGTCCGAAGATTCAACTTCTAATGTGATGGT 1015679 Query 39252 TTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| || ||||| Sbjct 1015678 CTTGCCGGTAAGTGTTTTGACAAAAATCTGCAT 1015646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545395831607