Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq9 134 9e-27
>seq9
Length=1275601
Score = 134 bits (148), Expect = 9e-27
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| |||||||| |||||| | || |||||||| ||||| | |||||||| || |
Sbjct 1015418 ATGCAAATTTTCGTAAAAACCTTAACCGGAAAAACAATCACATTAGAAGTTGAGTCTTCT 1015477
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | || || | |||||||| | || || ||||||||| | || ||||| ||
Sbjct 1015478 GATACGATCGACAACGTCAAAACAAAGA-TTCAAGATAAAGAAGGTATCCCACCAGACCA 1015536
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| || |||| || ||||| |||||||| || |||| ||||| | ||||||||
Sbjct 1015537 GCAACGCCTAATCTTCGCCGGTAAACAACTCGAGGACGGCCGCACACTGTCTGATTACAA 1015596
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| ||||||||||| || | || | ||||| ||||||| || ||
Sbjct 1015597 CATCCAAAAAGAGTCTACCCTCCACCTTGTTTTGCGGTTGCGCGGTGG 1015644
Score = 131 bits (144), Expect = 1e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || ||||| || || || || || ||||| | |||||||| || ||
Sbjct 1015646 ATGCAGATTTTTGTCAAAACACTTACCGGCAAGACCATCACATTAGAAGTTGAATCTTCG 1015705
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || || ||||||| || || |||||| | || || || ||
Sbjct 1015706 GACACGATTGACAATGTCAAGAC-AAAAATTCAGGATAAGGAAGGTATTCCACCCGACCA 1015764
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||||||||| ||||| ||||| | || || | || |||||
Sbjct 1015765 ACAGCGCCTCATCTTTGCCGGCAAGCAACTTGAAGATGGCCGTACGCTTTCAGACTACAA 1015824
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|| || |||||| ||| | || || ||||| || ||||| ||||||
Sbjct 1015825 TATCCAGAAAGAGAGCACTCTGCACTTGGTTTTGAGATTGCGTGGAGGA 1015873
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009439339812
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |