Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq9 134 3e-26
seq5 107 5e-18
seq22 84.2 5e-11
>seq9
Length=1275601
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 225505 ACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCT 225564
||||||||||| || || |||||||||| |||||||| | || || | || || ||
Sbjct 1015626 ACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGACAGTGTGCGGCCGTCCTCG 1015567
Query 225565 AGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624
|| || || || |||||||| || ||||| ||||| || || |||||||| || |||||
Sbjct 1015566 AGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGA 1015507
Query 225625 ATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTG 225684
|||||| || || ||||| || || || | || || ||||| ||||| || ||
Sbjct 1015506 ATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAACTTCTAATGTGATTGTTTTT 1015447
Query 225685 CCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || ||||||| ||| | ||||||
Sbjct 1015446 CCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418
Score = 134 bits (148), Expect = 3e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| | ||||| || | ||| |||||| ||||| |||| |||||| || | | ||
Sbjct 1015867 ACGCAATCTCAAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAGTCTGAAAGCGT 1015808
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || ||||| || || ||||| || || ||||||||||| ||||||||
Sbjct 1015807 ACGGCCATCTTCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGAATACC 1015748
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || || || ||| ||| ||| || || ||||| || | ||| || |||||
Sbjct 1015747 TTCCTTATCCTGAATTTTTGTCTTGACATTGTCAATCGTGTCCGAAGATTCAACTTCTAA 1015688
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
||||| |||||||| || | |||||
Sbjct 1015687 TGTGATGGTCTTGCCGGTAAGTGTTTT 1015661
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | |||||||||||||||||||| || || || | |||||||| | | ||
Sbjct 1015410 CGAAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAATCCGAGAGGGTG 1015351
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| ||||| || || || || ||||||||||| | |||||| |||||||| || || |||
Sbjct 1015350 CGACCATCCTCGAGTTGTTTACCAGCGAAGATCAATCGTTGCTGGTCGGGGGGGATGCCT 1015291
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|| ||||| |||||||| |||||| |||||||| || || | || || || |
Sbjct 1015290 TCTTTGTCCTGGATCTTGGTTTTCACATTGTCGATGGTATCAGAAGACTCGACCTCAAGG 1015231
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTT 225698
|| || |||||||| || | ||| ||
Sbjct 1015230 GTAATAGTCTTGCCAGTAAGAGTCTT 1015205
Score = 113 bits (124), Expect = 1e-19
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | |||||| || || || |||| ||||| |||| | || | ||||||
Sbjct 1015114 AGGACCAAGTGGAGGGTACTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 1015055
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || |||||||| || | ||||||||||| || || || || |||||||||
Sbjct 1015054 TCAAGCTGTTTACCAGCGAAAATCAAGCGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCT 1014995
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| || ||||| || || || || || | ||||| |||
Sbjct 1014994 TGGATCTTAGTCTTAACATTATCAATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTC 1014935
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||| || || | ||| | |||||
Sbjct 1014934 TTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 1014903
>seq5
Length=1732373
Score = 107 bits (118), Expect = 5e-18
Identities = 122/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
||||||| ||| |||||| |||||| | ||||| || |||||||| || ||||| ||
Sbjct 840094 TTTTGGATATTATAATCGCTCAAAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAAATC 840153
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
| ||| |||||||| ||||||||||| |||||||| || ||||| ||| ||| ||
Sbjct 840154 AATCGCTGTTGGTCTGGCGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTATCA 840213
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| || || | || || || | ||||| |||||||| ||
Sbjct 840214 ATTGTATCGCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 840257
>seq22
Length=47680
Score = 84.2 bits (92), Expect = 5e-11
Identities = 140/199 (70%), Gaps = 5/199 (3%)
Strand=Plus/Plus
Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGAT 7499
||| ||||||||||| |||| | ||||||||| | ||||||| || ||| | |
Sbjct 18805 AACATTATATTTAATGTTTGCTTTATTTTCTGGTTTATTAGGTACAGCTTTCTCTGTACT 18864
Query 7500 TATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATATTGAGTGGTAATAGCCAACTTT 7558
|| || | ||||| |||| || ||| ||| |||||| | |||| ||||| |
Sbjct 18865 AATCAGACTTGAATTGTCTGCACCTGGTGTACAATATATTG-CAGATAAT---CAACTAT 18920
Query 7559 ACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTA 7618
| || ||||||||| || ||||| | | |||||||| ||| | |||||||| | |
Sbjct 18921 ATAATAGTATTATTACAGCACATGCTATAATGATGATTTTTTTTATGGTTATGCCTGCTT 18980
Query 7619 TGATAGGCGGTTTCGGAAA 7637
| || || |||||||| ||
Sbjct 18981 TAATTGGAGGTTTCGGTAA 18999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530604107066
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |