Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq6 114 1e-20 >seq6 Length=1499889 Score = 114 bits (126), Expect = 1e-20 Identities = 198/287 (69%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868 || |||| || || ||||| || || ||| || |||| ||||| || ||||| || Sbjct 78487 GGTTCTTTGATGTATGTGTCAATCAGAAGGGAGTATGTTTCTGAATGGATGTTTTCCATC 78546 Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTT 4928 ||||||||||| || || || | || |||| | ||| ||||| || || | Sbjct 78547 ATGATCTGAAATCCATAGAAACAACGGGCCTCTGGGATTTGGACTTCACCACTGAAGCGC 78606 Query 4929 TCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGAT 4988 || || | ||| ||||| || || |||||| || || || || |||| ||| |||| Sbjct 78607 TCCACAAGGTTCTCGTTGACAATTCCGTCAGAAGCGGCGAAGAATGCCAGCACACGAGAG 78666 Query 4989 ATAAAGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAA 5045 | |||||| | |||||| || ||| || ||||||| | | | |||||| | || Sbjct 78667 ACAAAGTATCGCTCGTCATCATTGAGTTTGTTGTTCCAGTCGTGAAGATCTTTGGACAAG 78726 Query 5046 TCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092 || | || ||| ||||||| || || ||||| || || |||||||| Sbjct 78727 TCGATCTCCTCAGCAGTCCAGAAAGATGCTTCAGCCTTCTTGTACAT 78773 Score = 91.5 bits (100), Expect = 1e-13 Identities = 174/253 (69%), Gaps = 10/253 (4%) Strand=Plus/Plus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| ||||||||| ||| || ||||| || || || || || ||||| | | | Sbjct 77872 ACACCAGCTTTTTGGTAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGCAAGC 77931 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT----TTCACACTT 4363 || || || ||||| || || || || || || | ||| |||||||| || || Sbjct 77932 GAGATGTTATCCATGAAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTGCCA--- 77988 Query 4364 TAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTT 4423 ||||||||||| || ||||| ||||| || || || || |||| ||| | | | |||| Sbjct 77989 -AGAGCTACAAGTAACCGGTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTT 78047 Query 4424 AATTCCAATTA-ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGG 4482 || |||| | | | || || || || | || || || ||||| || || |||| Sbjct 78048 CATGCCAAGGAGAGCACA-TGGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCACGG 78106 Query 4483 CTTCTGTGATTAT 4495 |||| |||| || Sbjct 78107 CTTCAATGATGAT 78119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049397017987