Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq6 114 1e-20
>seq6
Length=1499889
Score = 114 bits (126), Expect = 1e-20
Identities = 198/287 (69%), Gaps = 3/287 (1%)
Strand=Plus/Plus
Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868
|| |||| || || ||||| || || ||| || |||| ||||| || ||||| ||
Sbjct 78487 GGTTCTTTGATGTATGTGTCAATCAGAAGGGAGTATGTTTCTGAATGGATGTTTTCCATC 78546
Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTT 4928
||||||||||| || || || | || |||| | ||| ||||| || || |
Sbjct 78547 ATGATCTGAAATCCATAGAAACAACGGGCCTCTGGGATTTGGACTTCACCACTGAAGCGC 78606
Query 4929 TCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGAT 4988
|| || | ||| ||||| || || |||||| || || || || |||| ||| ||||
Sbjct 78607 TCCACAAGGTTCTCGTTGACAATTCCGTCAGAAGCGGCGAAGAATGCCAGCACACGAGAG 78666
Query 4989 ATAAAGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAA 5045
| |||||| | |||||| || ||| || ||||||| | | | |||||| | ||
Sbjct 78667 ACAAAGTATCGCTCGTCATCATTGAGTTTGTTGTTCCAGTCGTGAAGATCTTTGGACAAG 78726
Query 5046 TCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092
|| | || ||| ||||||| || || ||||| || || ||||||||
Sbjct 78727 TCGATCTCCTCAGCAGTCCAGAAAGATGCTTCAGCCTTCTTGTACAT 78773
Score = 91.5 bits (100), Expect = 1e-13
Identities = 174/253 (69%), Gaps = 10/253 (4%)
Strand=Plus/Plus
Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307
|||||| ||||||||| ||| || ||||| || || || || || ||||| | | |
Sbjct 77872 ACACCAGCTTTTTGGTAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGCAAGC 77931
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT----TTCACACTT 4363
|| || || ||||| || || || || || || | ||| |||||||| || ||
Sbjct 77932 GAGATGTTATCCATGAAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTGCCA--- 77988
Query 4364 TAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTT 4423
||||||||||| || ||||| ||||| || || || || |||| ||| | | | ||||
Sbjct 77989 -AGAGCTACAAGTAACCGGTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTT 78047
Query 4424 AATTCCAATTA-ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGG 4482
|| |||| | | | || || || || | || || || ||||| || || ||||
Sbjct 78048 CATGCCAAGGAGAGCACA-TGGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCACGG 78106
Query 4483 CTTCTGTGATTAT 4495
|||| |||| ||
Sbjct 78107 CTTCAATGATGAT 78119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049397017987
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |