Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq7 288 1e-72 seq6 87.8 2e-12 >seq7 Length=1353353 Score = 288 bits (318), Expect = 1e-72 Identities = 610/907 (67%), Gaps = 10/907 (1%) Strand=Plus/Minus Query 77916 TATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCAC 77975 |||||| | || ||||| ||||| | ||||| | | ||||| || ||||| || Sbjct 416209 TATAGCTGCTCGAATTCGTCTCCGTAGACATCGGCGAGTCCAGATGCCTCGTTTGGACAG 416150 Query 77976 ATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGA 78035 | | || ||| || |||| | || ||| |||||||| || | || || |||| || Sbjct 416149 AATAGTGTCCAATCGCCATTCTTCTCAACCCGTTTCATGAACAAGTCGGGAGTCCAGAGG 416090 Query 78036 GCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTA---AGATCG 78092 || | || |||||||||| ||| |||||| || || || |||||| || || Sbjct 416089 GCGAGGAAAAGATCTCGGGCTCTCACTTCTTCTTTACC---ATGATTTTTACGGAGGTCC 416033 Query 78093 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGT 78152 | |||||| | | ||||| ||||| ||||| ||||| || || | | | ||||| ||| Sbjct 416032 AAAAACTCAAATACGTCAGAGTGCCAAGGTTCAAGATAAATAGCAAAAGCACCAGGGCGT 415973 Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 ||||| || |||||||| | ||||||||| || || ||| | || | | ||| ||||| Sbjct 415972 TTATTGCCGCCCTGATCCACATATCTGGCAGTATTGTTAAAGACACGAAGCATGGGAATG 415913 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 || || ||||| | ||||||||||| | ||| || ||| |||| || || | Sbjct 415912 ATCCCATTAGAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTTGCACGGATTCGGTGA 415853 Query 78273 ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCG 78332 | | | || || || || || |||| || || ||||| || |||| |||||| Sbjct 415852 ACGTTGAGTCCAATACCCCCAGCAGTCTTGGAAATCAGAGCACATGTCTTCAGTGTATCA 415793 Query 78333 TAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA 78392 ||||| ||||| ||||| || ||| |||| | || ||| || ||| || ||| || | Sbjct 415792 TAGATCCCCTCAATACTATCCTCCTTCATATCAATAAGGAAGCAGGAAGCCATCTGTGGT 415733 Query 78393 TGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGT 78452 ||| ||||| ||||| || | ||| ||||| || || ||||| |||||| || | Sbjct 415732 TGAGGTGTTCCCGCATTGAAAAGTGTGGGAGAAGCGTGGGTAAAAAATTTTTGGGACATC 415673 Query 78453 AGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGC 78512 || | |||||| ||||| ||| || |||||| |||||||| || || || || ||| Sbjct 415672 AGGTGGTATGTCTCAATCGCTTTATCAATGTCCTCATGATGAATACCAACGGCAACGCGC 415613 Query 78513 ATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTT 78572 || | ||||||||| || | |||| | || || ||| | | | || || | Sbjct 415612 ATAATCATATGCTGCGGACGTTCAGCAACTTTGCCGTTGATTCTTAGTAGATACGACCTC 415553 Query 78573 TCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTCTCGTAAATAATAACAG 78630 |||| || || || ||||| || | ||| ||||| || | || |||| ||| | | Sbjct 415552 TCCAGTGTCTTGAACCCAAAGTACTGGTAGTTGAAA--TCACGGTCATAAACGATAGCGG 415495 Query 78631 AATTTAGTTTATCTTTGTATTTGGTAACAATATCCATGACAGTAGTTGAAATAATAGGAG 78690 | || || | || || ||| | |||||||| | | | || || || |||| Sbjct 415494 AGTTCAGCTCTTCGGCGTGTTTCATTACAATATCGTATATTTTTCTGGATATCATGGGAG 415435 Query 78691 ATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATA 78750 | || || || || ||||| || | | |||||| || || |||| Sbjct 415434 CAGGGCGGTTGTTCTTTGGGTTCACATATCTATAGAGATCTTCGATAACGGACGAAAATT 415375 Query 78751 GtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAAT 78810 |||| || |||| |||||| | || || || || ||||| ||||| || || ||||||| Sbjct 415374 GTTTCTTGGTTTGCTTGTGCAAGTTGGACACGGCGATTCTAGCAGCAAGGATGGCATAAT 415315 Query 78811 CAGGATG 78817 |||| || Sbjct 415314 CAGGGTG 415308 Score = 190 bits (210), Expect = 3e-43 Identities = 701/1093 (64%), Gaps = 15/1093 (1%) Strand=Plus/Minus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || || |||||||| | ||| || | | || || ||||||||||| || ||||| | | Sbjct 417403 GTGAATTGAATTGGGGCAGAAGCAGCCATAGTCCGAAGATAGTACATGCCGGTTTTCAAA 417344 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 || | |||| || ||||||||||| || | |||| | || || | | Sbjct 417343 CCTAATTTCCAGCCAGCAAAATGCATGCTAGTAATTTTGCCCATTGTGGGCTCCTTAAGA 417284 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 |||||||| | || || ||||||||||||||| || | ||| || ||||| | | | Sbjct 417283 TGAATATTGAGGGATTGGGATTGATCGATGAAAGCACCACGATCTGCAGCCATCTGAACA 417224 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 || ||| |||| ||||||||| | ||| ||| ||| |||||| ||||| || | Sbjct 417223 ATAGTCCGCTGAGAAATTTCCCATACAGTCTTGTAAAGGGCTTTGATGTCATCGGGGATA 417164 Query 77022 TTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 || | |||||||||| || |||||||| | || || ||| || || | ||| | Sbjct 417163 TTGGGAATATTTTGAATTGAGCCACCATCAGCGATGATGCGATTTTTCATGTTGTCAGAC 417104 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 || | | || | | || | || || || ||||| | ||| |||||||| Sbjct 417103 CAAAGTCCAAGGTCAACAAGATCTTTCAGAAGCCATGGGTTAACAACTTGGAATTCTCCT 417044 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 | | |||| |||| || ||||| ||| ||||| || | |||| ||| || Sbjct 417043 GCAAGGACTCGCCGAGAATAGATATTTGAGGTGTATGGCTCAAAGCATTCGTTGAAGCCA 416984 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258 | ||||| ||| |||||| |||||||| || || | | ||| || | | ||| Sbjct 416983 AGGATTTGGCTGGTACTAGCAGTGGGCATAGGGGCAACAAGAAGACTGTTGCGTACACCG 416924 Query 77259 TGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCC 77318 ||| || |||| | || ||| | |||||||||||| || |||||| || | | Sbjct 416923 TGTTTTGCTATTTCTTTCTTAAGAGAAACCCAATCCCAAAGGTCAGAAGGTGTTACGTTC 416864 Query 77319 CAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGT 77378 || | ||| || || | |||||| | | | || || || | ||||||||| || || Sbjct 416863 CACATATCATACTGCAAAATTCCCTGAGAAACAGGAGAACCTTCATATGTTTCGTATGGG 416804 Query 77379 CCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAA 77438 ||||| || | | ||||| || || || || | | |||||||| || || Sbjct 416803 CCTTCGGTCTTTGAAAGTTCGCAGGATGCAGTCAGGGCGGCATGGTAAATTGTCTCAAAG 416744 Query 77439 ATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAG 77498 |||| |||| || | | || | | ||||| || || ||| | | ||| Sbjct 416743 ATCTGAATATTCAGCTGCTTAGCCTGAGAGGAGTCAAAAGGCAAACGTAGAGCCAAGAAG 416684 Query 77499 GCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTA 77558 ||||| || | ||| ||||| |||| | |||| || | ||| | || || | Sbjct 416683 GCATCAGCGAGTCCTTGAACCCCAAGAGCAATTGGGCGATGACGGAAGTTACTCTTTCGA 416624 Query 77559 GCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACT 77618 ||||| |||| || || | || | || || || || || | ||| | || || ||| Sbjct 416623 GCTTCGGGAACGGGGTAGTGGTTGTTATCAATGATCTTGTTTAAATTGCGCACCACAACT 416564 Query 77619 T---TAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCTATAAC--AAAC--AT 77671 | | || ||| | | |||| ||| || | || ||| | ||| || Sbjct 416563 TGGGTGACTGCGTGC---AATTTACCAAAGTCGTACTCGCCGCGGATAGCGTCAACGTAT 416507 Query 77672 GTT--CAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGT 77729 ||| |||||| | ||||||||||| || || || || |||| | | | ||| | Sbjct 416506 GTTGGCAAAGCAAGTGATGCTAGATTGCACACGGCGACTTCATCGGGGGCAGTATACTCA 416447 Query 77730 ATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTT 77789 || || || ||||||| |||| || | | ||||| || || || | ||||||||||| Sbjct 416446 ATAATTTCCGTACATAAATTAGAACTTCTAATAGTTCCAAGGTTCTTCTGGTTGCTCTTC 416387 Query 77790 TTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATA 77849 ||| || | ||||| ||||| || || ||| | || || || | || | ||| | Sbjct 416386 CGATTACAGGCATCCTTGTAAAGCATGAAAGGATTTCCAGTCTCGGTTTGAGCTTCCAAG 416327 Query 77850 ATAGATTTCCAGA 77862 |||| | ||||| Sbjct 416326 ATAGCGTACCAGA 416314 >seq6 Length=1499889 Score = 87.8 bits (96), Expect = 2e-12 Identities = 219/332 (66%), Gaps = 3/332 (1%) Strand=Plus/Plus Query 48363 GTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATT 48422 || || ||||||| ||||||| || | || || ||||| | ||| || || || Sbjct 78451 GTATCGATAGCATCAAAGAGATAGGTACGTTGCTTCGGTTCTTTGATGTATGTGTCAATC 78510 Query 48423 AAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACAT 48482 | ||| || |||| || || || ||||| || ||||||||||| || ||||| Sbjct 78511 AGAAGGGAGTATGTTTCTGAATGGATGTTTTCCATCATGATCTGAAATCCATAGAAACAA 78570 Query 48483 CTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATT 48542 | || |||| ||| || || || || || || || | | ||||| || || ||| Sbjct 78571 CGGGCCTCTGGGATTTGGACTTCACCACTGAAGCGCTCCACAAGGTTCTCGTTGACAATT 78630 Query 48543 CCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTC 48602 || ||| ||| || || ||||| | ||| | | ||| ||| |||| | | Sbjct 78631 CCGTCAGAAGCGGCGAAGAATGCCAGCACACGAGAGACAAAGTATCGCTCGTCATCATTG 78690 Query 48603 AGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAAT 48659 ||| || |||||||| | | |||||| || | || | || ||||| ||||| || Sbjct 78691 AGTTTGTTGTTCCAGTCGTGAAGATCTTTGGACAAGTCGATCTCCTCAGCAGTCCAGAAA 78750 Query 48660 GATGCCTCTGCTTTTTTATACATATTCCATAT 48691 ||||| || || || || ||||| | ||| || Sbjct 78751 GATGCTTCAGCCTTCTTGTACATTTGCCAGAT 78782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668461348960