Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq7 282 6e-71 seq6 95.1 2e-14 >seq7 Length=1353353 Score = 282 bits (312), Expect = 6e-71 Identities = 611/908 (67%), Gaps = 12/908 (1%) Strand=Plus/Minus Query 76511 TATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACAC 76570 |||| | | || ||||| ||||| | ||||| | | |||| || || ||||| Sbjct 416209 TATAGCTGCTCGAATTCGTCTCCGTAGACATCGGCGAGTCCAGATGCCTCGTTTGGACAG 416150 Query 76571 ATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGA 76630 | | || ||| || |||| | || |||||||||||| || | || || |||| || Sbjct 416149 AATAGTGTCCAATCGCCATTCTTCTCAACCCGTTTCATGAACAAGTCGGGAGTCCAGAGG 416090 Query 76631 GCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTA---AGATCT 76687 || | || |||||||||| ||| |||||| || || || |||||| || || Sbjct 416089 GCGAGGAAAAGATCTCGGGCTCTCACTTCTTCTTTACC---ATGATTTTTACGGAGGTCC 416033 Query 76688 AGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGT 76747 | ||||| | | ||||| ||||| ||||| ||||| || || | | |||| || ||| Sbjct 416032 AAAAACTCAAATACGTCAGAGTGCCAAGGTTCAAGATAAATAGCAAAAGCACCAGGGCGT 415973 Query 76748 TTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATA 76807 ||||| || |||||||| | |||||||||||| || ||| | || | | ||| ||||| Sbjct 415972 TTATTGCCGCCCTGATCCACATATCTGGCAGTATTGTTAAAGACACGAAGCATGGGAATG 415913 Query 76808 ATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTA 76867 || || ||||| | ||||||||||| | ||| || ||| |||||| || | | Sbjct 415912 ATCCCATTAGAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTTGCACGGAT-TCGGTG 415854 Query 76868 ATAGAT-AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTC 76926 | | | || || || || || || | || || || |||||||| |||| ||| || Sbjct 415853 AACGTTGAGTCCAATACCCCCAGCAGTCTTGGAAATCAGAGCACATGTCTTCAGTGTATC 415794 Query 76927 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 76986 |||||| ||||| |||||||| ||| |||| | || ||| || ||| || ||| || | Sbjct 415793 ATAGATCCCCTCAATACTATCCTCCTTCATATCAATAAGGAAGCAGGAAGCCATCTGTGG 415734 Query 76987 ATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAG 77046 ||| ||||| ||||| || | ||| ||||| || || || || |||||| || | Sbjct 415733 TTGAGGTGTTCCCGCATTGAAAAGTGTGGGAGAAGCGTGGGTAAAAAATTTTTGGGACAT 415674 Query 77047 TAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACG 77106 || | |||||| ||||| || || || ||| |||||||| || || || || || Sbjct 415673 CAGGTGGTATGTCTCAATCGCTTTATCAATGTCCTCATGATGAATACCAACGGCAACGCG 415614 Query 77107 CATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTT 77166 ||| | ||||||||| || ||||| || || || ||| | | | || || | Sbjct 415613 CATAATCATATGCTGCGGACGTTCAGCAACTTTGCCGTTGATTCTTAGTAGATACGACCT 415554 Query 77167 TTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACC 77224 |||| || || || ||||| || | ||| ||||| || | || |||| ||| | Sbjct 415553 CTCCAGTGTCTTGAACCCAAAGTACTGGTAGTTGAAA--TCACGGTCATAAACGATAGCG 415496 Query 77225 GAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATGACAGTGGTAGAAATAATTGGA 77284 || || || | || | ||| | |||||||| | | | || || || ||| Sbjct 415495 GAGTTCAGCTCTTCGGCGTGTTTCATTACAATATCGTATATTTTTCTGGATATCATGGGA 415436 Query 77285 GATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAAT 77344 | | || || || || ||||| || | | ||||| || ||| |||| Sbjct 415435 GCAGGGCGGTTGTTCTTTGGGTTCACATATCTATAGAGATCTTCGATAACGGACGAAAAT 415376 Query 77345 AGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAG 77404 |||| || |||| |||||| | || || ||||| ||||||||||| || || ||||| Sbjct 415375 TGTTTCTTGGTTTGCTTGTGCAAGTTGGACACGGCGATTCTAGCAGCAAGGATGGCATAA 415316 Query 77405 TCAGGATG 77412 ||||| || Sbjct 415315 TCAGGGTG 415308 Score = 187 bits (206), Expect = 4e-42 Identities = 716/1114 (64%), Gaps = 34/1114 (3%) Strand=Plus/Minus Query 75366 TCTT-ATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATA 75424 |||| ||| | |||||| ||||| || | || || | | || || ||||||||||| Sbjct 417415 TCTTGATCAACCGTGAATTGAATTGGGGCAGAAGCAGCCATAGTCCGAAGATAGTACATG 417356 Query 75425 CCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTC 75484 || ||||| | ||| | |||| || ||||||||||| || | |||| | Sbjct 417355 CCGGTTTTCAAACCTAATTTCCAGCCAGCAAAATGCATGCTAGTAATTTTGCCCATTGTG 417296 Query 75485 GGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCC 75544 || || | ||||||||| | || || ||||||||||||||| || | ||| || Sbjct 417295 GGCTCCTTAAGATGAATATTGAGGGATTGGGATTGATCGATGAAAGCACCACGATCTGCA 417236 Query 75545 GCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATA 75604 ||||| | | ||| ||| |||| ||||||||| | ||| ||| ||| |||||| Sbjct 417235 GCCATCTGAACAATAGTCCGCTGAGAAATTTCCCATACAGTCTTGTAAAGGGCTTTGATG 417176 Query 75605 TCATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTG 75661 ||||| || | ||| | |||||||||| || || ||||||| || || ||| || Sbjct 417175 TCATCGGGGATATTGGGAATATTTTGAATTGAGCCACCATCAGCGATGATGCGATTTTTC 417116 Query 75662 ATCTCATCATTCCACAATTTTCTCTCGGTTAA----AACTCTAAGGAGATGAGGATTAAC 75717 || | ||| ||| | | | ||| || | || | || || || ||||| Sbjct 417115 ATGTTGTCAGACCAAAGT----CCAAGGTCAACAAGATCTTTCAGAAGCCATGGGTTAAC 417060 Query 75718 AATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCAC 75777 || ||| |||||||| | | |||| |||| || ||||| ||| ||||| || | Sbjct 417059 AACTTGGAATTCTCCTGCAAGGACTCGCCGAGAATAGATATTTGAGGTGTATGGCTCAAA 417000 Query 75778 AGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAA 75837 |||| ||| || | ||||| || |||||| |||||||| || || | | Sbjct 416999 GCATTCGTTGAAGCCAAGGATTTGGCTGGTACTAGCAGTGGGCATAGGGGCAACAAGAAG 416940 Query 75838 ACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATC 75897 ||| || | | ||| ||| || |||| | || ||| | |||||||||||| || Sbjct 416939 ACTGTTGCGTACACCGTGTTTTGCTATTTCTTTCTTAAGAGAAACCCAATCCCAAAGGTC 416880 Query 75898 TGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATT 75957 || ||| || | ||| | ||| || || | |||||| | | || || || | Sbjct 416879 AGAAGGTGTTACGTTCCACATATCATACTGCAAAATTCCCTGAGAAACAGGAGAACCTTC 416820 Query 75958 ATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTA 76017 |||||||||||| | || || | | | |||||||| || | || | | Sbjct 416819 ATATGTTTCGTATGGGCCTTCGGTCTTTGAAAGTTCGCAGGATGCAGTCAGGGCGGCATG 416760 Query 76018 ATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTA-TCAAAAGGAT 76076 |||||||| || || |||| |||| || | | || | ||| | |||||||| Sbjct 416759 GTAAATTGTCTCAAAGATCTGAATATTCAGCTGCTTAGCCT-GAGAGGAGTCAAAAGGCA 416701 Query 76077 AATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTC 76136 || ||| | | || ||||| || ||||| ||||| |||| | |||| || | ||| | Sbjct 416700 AACGTAGAGCCAAGAAGGCATCAGCGAGTCCTTGAACCCCAAGAGCAATTGGGCGATGAC 416641 Query 76137 ---TCTTATTGGAAATTTC-AGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTA 76192 ||| | |||| |||||| |||| ||||| | || |||| || || || Sbjct 416640 GGAAGTTACT----CTTTCGAGCTTCGGGAACGGGGTAGTGGTTGTTATCAATGATCTTG 416585 Query 76193 TTGAGATTTCTGACAACTACTT---TAACCACGTCCTTTAGTTTGAGAAAATCAAATTTT 76249 || | ||| | || || |||| | || ||| | | ||| ||| || | | Sbjct 416584 TTTAAATTGCGCACCACAACTTGGGTGACTGCGTGC---AATTTACCAAAGTCGTACTCG 416528 Query 76250 C--CATCTATCACAAACATAT----TAAGAGCTATAGATGCTAGATTACAAACGGCTACC 76303 | | || | ||| ||| | ||| | ||||||||||| || ||||| || Sbjct 416527 CCGCGGATAGCGTCAACGTATGTTGGCAAAGCAAGTGATGCTAGATTGCACACGGCGACT 416468 Query 76304 TCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCA 76363 |||| | | ||| | || || ||||| |||| |||| || | ||||||||| Sbjct 416467 TCATCGGGGGCAGTATACTCAATAATTTCCGTACATAAATTAGAACTTCTAATAGTTCCA 416408 Query 76364 AGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCA 76423 || || | ||||||||||| ||||| | ||||| ||||| | || ||| ||||| Sbjct 416407 AGGTTCTTCTGGTTGCTCTTCCGATTACAGGCATCCTTGTAAAGCATGAAAGGATTTCCA 416348 Query 76424 GTTTCAATCTGTGATTCGATAATAGATTTCCAGA 76457 || || | || | ||| | |||| | ||||| Sbjct 416347 GTCTCGGTTTGAGCTTCCAAGATAGCGTACCAGA 416314 >seq6 Length=1499889 Score = 95.1 bits (104), Expect = 2e-14 Identities = 225/334 (67%), Gaps = 7/334 (2%) Strand=Plus/Plus Query 46852 GTTTCTATAGCATTAAAGAGAAAGttttttt-CATCACTATCTTTAACATATGTATCTAT 46910 || || ||||||| ||||||| || | || | || | ||||| | ||||| || || Sbjct 78451 GTATCGATAGCATCAAAGAGATAGGTACGTTGCTTCGGT-TCTTTGATGTATGTGTCAAT 78509 Query 46911 TAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACA 46970 | ||| || |||||||||| |||||||| || ||||||||||| || ||||| Sbjct 78510 CAGAAGGGAGTATGTTTCTGAATGGATGTTTTCCATCATGATCTGAAATCCATAGAAACA 78569 Query 46971 TCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAA-ATTCTCATTCACTA 47029 | || || | || || || || || || || || |||| ||||| || || | Sbjct 78570 ACGGGCCTCTGGGATTTGGACTTCACCACTGAAGCGCTC-CACAAGGTTCTCGTTGACAA 78628 Query 47030 TTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAG 47089 |||| ||| ||| || || ||||||| ||| | | ||| ||| || || | Sbjct 78629 TTCCGTCAGAAGCGGCGAAGAATGCCAGCACACGAGAGACAAAGTATCGCTCGTCATCAT 78688 Query 47090 TCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGA 47146 | ||| || |||||||| | | |||||| || | || | || ||||| ||||||| Sbjct 78689 TGAGTTTGTTGTTCCAGTCGTGAAGATCTTTGGACAAGTCGATCTCCTCAGCAGTCCAGA 78748 Query 47147 ATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180 | || || || || || || ||||| | ||| || Sbjct 78749 AAGATGCTTCAGCCTTCTTGTACATTTGCCAGAT 78782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934052444480