Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq9 111 4e-19 seq2 84.2 5e-11 >seq9 Length=1275601 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 ||||| || || |||||||||||||||||||||||||| | | || | || || || Sbjct 1015626 ACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGACAGTGTGCGGCCGTCCTCG 1015567 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || ||| ||||||||||| || | |||||||| | | ||| ||||| || |||||| Sbjct 1015566 AGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGA 1015507 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || ||| |||||| | || | | || ||| ||| ||||| | || || ||||| Sbjct 1015506 ATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAACTTCTAATGTGATTGTTTTT 1015447 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | || || ||||| | ||||| Sbjct 1015446 CCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418 Score = 109 bits (120), Expect = 1e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || ||||| ||||| || || ||||||||||| | | || | ||||| Sbjct 1015401 AGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGACCATCC 1015342 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || |||||||| | | |||||||| | | ||| ||||| || || Sbjct 1015341 TCGAGTTGTTTACCAGCGAAGATCAATCGTTGCTGGTCGGGGGGGATGCCTTCTTTGTCC 1015282 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||| ||| | || | | | || ||| ||| || ||||| |||||||| Sbjct 1015281 TGGATCTTGGTTTTCACATTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTAATAGTC 1015222 Query 152073 TTGCCCGTGAGAGTCTTCAC 152092 ||||| || |||||||| || Sbjct 1015221 TTGCCAGTAAGAGTCTTGAC 1015202 Score = 91.5 bits (100), Expect = 3e-13 Identities = 156/222 (70%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | || || ||| ||| || ||||||||||| |||| | || | Sbjct 1015121 GAGGCGGAGGACCAAGTGGAGGGTACTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCG 1015062 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGAT-AAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 |||||||| || ||| || ||||| || |||| | || ||||| | | ||| || | Sbjct 1015061 GCCATCTTCAAGCTGTTTACCAGCGAAAATCAAGCGT-TGTTGGTCTGGAGGGATGCCCT 1015003 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAG 152062 |||| ||||| || || || ||| | || | | | | ||| | ||| || ||||| Sbjct 1015002 CCTTGTCTTGGATCTTAGTCTTAACATTATCAATGGTATCGCTGGA--CTCGACCTCAAG 1014945 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || ||||| ||||||| |||||| Sbjct 1014944 GGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 1014903 >seq2 Length=1931404 Score = 84.2 bits (92), Expect = 5e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||||||||| ||||| || ||||| || ||||||||||| || | | || | Sbjct 802227 GAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCG 802168 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || ||| |||||||| || || | ||||||||| | | ||| || || Sbjct 802167 GCCATCCTCCAGCTGTTTGCCGGCGAAAATCAGACGCTGCTGGTCAGGGGGGATGCCCTC 802108 Query 152006 CTTTTCTTGAATTTTT 152021 ||| ||| || |||| Sbjct 802107 CTTGTCTAGAGGTTTT 802092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820223450169