Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq9 111 4e-19
seq2 84.2 5e-11
>seq9
Length=1275601
Score = 111 bits (122), Expect = 4e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
||||| || || |||||||||||||||||||||||||| | | || | || || ||
Sbjct 1015626 ACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGACAGTGTGCGGCCGTCCTCG 1015567
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
|| ||| ||||||||||| || | |||||||| | | ||| ||||| || ||||||
Sbjct 1015566 AGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGA 1015507
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
|| ||| |||||| | || | | || ||| ||| ||||| | || || |||||
Sbjct 1015506 ATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAACTTCTAATGTGATTGTTTTT 1015447
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || | || || ||||| | |||||
Sbjct 1015446 CCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418
Score = 109 bits (120), Expect = 1e-18
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|||||||| || ||||| ||||| || || ||||||||||| | | || | |||||
Sbjct 1015401 AGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGACCATCC 1015342
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || ||| || |||||||| | | |||||||| | | ||| ||||| || ||
Sbjct 1015341 TCGAGTTGTTTACCAGCGAAGATCAATCGTTGCTGGTCGGGGGGGATGCCTTCTTTGTCC 1015282
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || ||| ||| | || | | | || ||| ||| || ||||| ||||||||
Sbjct 1015281 TGGATCTTGGTTTTCACATTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTAATAGTC 1015222
Query 152073 TTGCCCGTGAGAGTCTTCAC 152092
||||| || |||||||| ||
Sbjct 1015221 TTGCCAGTAAGAGTCTTGAC 1015202
Score = 91.5 bits (100), Expect = 3e-13
Identities = 156/222 (70%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| | || || ||| ||| || ||||||||||| |||| | || |
Sbjct 1015121 GAGGCGGAGGACCAAGTGGAGGGTACTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCG 1015062
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGAT-AAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004
|||||||| || ||| || ||||| || |||| | || ||||| | | ||| || |
Sbjct 1015061 GCCATCTTCAAGCTGTTTACCAGCGAAAATCAAGCGT-TGTTGGTCTGGAGGGATGCCCT 1015003
Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAG 152062
|||| ||||| || || || ||| | || | | | | ||| | ||| || |||||
Sbjct 1015002 CCTTGTCTTGGATCTTAGTCTTAACATTATCAATGGTATCGCTGGA--CTCGACCTCAAG 1014945
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || || ||||| ||||||| ||||||
Sbjct 1014944 GGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 1014903
>seq2
Length=1931404
Score = 84.2 bits (92), Expect = 5e-11
Identities = 100/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||||||||| ||||| || ||||| || ||||||||||| || | | || |
Sbjct 802227 GAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCG 802168
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || ||| |||||||| || || | ||||||||| | | ||| || ||
Sbjct 802167 GCCATCCTCCAGCTGTTTGCCGGCGAAAATCAGACGCTGCTGGTCAGGGGGGATGCCCTC 802108
Query 152006 CTTTTCTTGAATTTTT 152021
||| ||| || ||||
Sbjct 802107 CTTGTCTAGAGGTTTT 802092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820223450169
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |