Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq9 159 7e-34
seq5 114 3e-20
seq2 111 3e-19
>seq9
Length=1275601
Score = 159 bits (176), Expect = 7e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| ||||| || |||| || | || || || || |||||||||||||| |
Sbjct 1015130 ACCGCCACGGAGGCGGAGGACCAAGTGGAGGGTACTCTCCTTCTGGATGTTGTAGTCGGA 1015071
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||||||||| || || ||||| || || || ||||| ||||||||||| ||
Sbjct 1015070 GAGGGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAAATCAAGCGTTGTTGGTCTGGAGG 1015011
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| |||||||||||||||||||| | || || |||| || || || | |||||
Sbjct 1015010 GATGCCCTCCTTGTCTTGGATCTTAGTCTTAACATTATCAATGGTATCGCTGGACTCGAC 1014951
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| || |||| ||||| ||||| ||||||||
Sbjct 1014950 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 1014903
Score = 149 bits (164), Expect = 1e-30
Identities = 151/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 282903 GTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCG 282962
||||| ||||| ||||| |||||||| | |||||| |||||||| || ||||| || |||
Sbjct 1015842 GTGCTCTCTTTCTGGATATTGTAGTCTGAAAGCGTACGGCCATCTTCAAGTTGCTTGCCG 1015783
Query 282963 GCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT 283022
|||||||| | || |||||||| |||||||| ||||| || || || |||| ||
Sbjct 1015782 GCAAAGATGAGGCGCTGTTGGTCGGGTGGAATACCTTCCTTATCCTGAATTTTTGTCTTG 1015723
Query 283023 ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTC 283082
|| | || || |||||||||| ||| ||||| | ||||| ||||| || || | ||
Sbjct 1015722 ACATTGTCAATCGTGTCCGAAGATTCAACTTCTAATGTGATGGTCTTGCCGGTAAGTGTT 1015663
Query 283083 TTAACGAATATCTGCAT 283099
|| || || ||||||||
Sbjct 1015662 TTGACAAAAATCTGCAT 1015646
Score = 147 bits (162), Expect = 5e-30
Identities = 147/191 (77%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
||||||||||||||||| |||| || |||||||| ||||| |||||||| ||||| |||
Sbjct 1015608 TCTTTTTGGATGTTGTAATCAGACAGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAG 1015549
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | ||||| ||||| || ||||| || || ||||| ||||||| ||| ||| |
Sbjct 1015548 ATTAGGCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGAATCTTTGTTTTGACGTTG 1015489
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
||||| || || |||| || ||||| | ||||| || || || || || || || |||
Sbjct 1015488 TCGATCGTATCAGAAGACTCAACTTCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACG 1015429
Query 283089 AATATCTGCAT 283099
|| || |||||
Sbjct 1015428 AAAATTTGCAT 1015418
>seq5
Length=1732373
Score = 114 bits (126), Expect = 3e-20
Identities = 135/180 (75%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|||||||| || || || | ||||| |||||||| || || || ||||| || |||
Sbjct 840094 TTTTGGATATTATAATCGCTCAAAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAAATC 840153
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATC 283030
|| || |||||||| |||||||||||||||||| || ||| ||||| || || ||||
Sbjct 840154 AATCGCTGTTGGTCTGGCGGAATACCCTCCTTGTCCTGAATC-TTGCTCTTGACATTATC 840212
Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| || || | ||||| || |||||||| ||||| || || | |||||||||||
Sbjct 840213 AATTGTATCGCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTAACGAA 840272
>seq2
Length=1931404
Score = 111 bits (122), Expect = 3e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || || || || | ||| || || |||||||||||||| |
Sbjct 802236 ACCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 802177
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || ||||| ||||| || |||| ||| || |||||| ||
Sbjct 802176 GAGGGTGCGGCCATCCTCCAGCTGTTTGCCGGCGAAAATCAGACGCTGCTGGTCAGGGGG 802117
Query 282992 AATACCCTCCTTGTCT 283007
|| ||||||||||||
Sbjct 802116 GATGCCCTCCTTGTCT 802101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738676957506
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |