Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq9 114 9e-21
seq5 86.0 5e-12
>seq9
Length=1275601
Score = 114 bits (126), Expect = 9e-21
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || || |||||||| ||||||||||| |||| ||| ||| | || ||
Sbjct 1015111 ACCAAGTGGAGGGTACTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCA 1015052
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || || || || ||||| || || || |||| ||| | || ||||| ||
Sbjct 1015051 AGCTGTTTACCAGCGAAAATCAAGCGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCTTGG 1014992
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | ||||| ||| ||| || ||||| | || || |||||
Sbjct 1014991 ATCTTAGTCTTAACATTATCAATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTTG 1014932
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
|| || |||||||| |||||||| ||||| |||
Sbjct 1014931 CCAGTCAGGGTCTTGACGAAGATCTGCATAATG 1014899
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/231 (70%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168
|||| || | || |||||| |||| ||| || |||||||| || ||||| ||||| || |
Sbjct 1015874 TTCCTCCACGCAATCTCAAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAGTCTG 1015815
Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
|| || | || || || ||||| ||||||||||| | ||||| || || | |
Sbjct 1015814 AAAGCGTACGGCCATCTTCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTG 1015755
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | ||||||||| ||| || || ||| || ||| | || ||||| | |||||
Sbjct 1015754 GAATACCTTCCTTATCCTGAATTTTTGTCTTGACATTGT--CAATCGTGTCCGAAGATTC 1015697
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | || || ||||| || || || || || || || || |||||
Sbjct 1015696 AACTTCTAATGTGATGGTCTTGCCGGTAAGTGTTTTGACAAAAATCTGCAT 1015646
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || | ||| || ||||| || || ||| |||||||||||||||||
Sbjct 1015648 CATACCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATC 1015589
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| |||| || || || || ||||| ||||| | || ||||| ||||
Sbjct 1015588 AGACAGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGG 1015529
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
|| | |||||| || || ||||| || || | ||| | || || || | || |
Sbjct 1015528 TGGGATACCTTCTTTATCTTGAATCTT-TGTTTTGACGTTGTCGATCGTATCAGAAGACT 1015470
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || | || || || ||||| || | ||| || ||||| ||||||||
Sbjct 1015469 CAACTTCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418
>seq5
Length=1732373
Score = 86.0 bits (94), Expect = 5e-12
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||||||||| || |||||| | ||| | || || |||||||| ||||| || |
Sbjct 840092 CCTTTTGGATATTATAATCGCTCAAAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAAA 840151
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267
|||| ||||| || |||| || | ||| ||||| ||| ||||| ||| | |
Sbjct 840152 TCAATCGCTGTTGGTCTGGCGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTAT 840211
Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327
| || || ||| || || ||||| | || || ||||| || ||||||||||| ||||
Sbjct 840212 CAATTGTATCGCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTAACGA 840271
Query 44328 AG 44329
||
Sbjct 840272 AG 840273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990228892063
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |