Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq9 172 1e-37
seq5 104 6e-17
>seq9
Length=1275601
Score = 172 bits (190), Expect = 1e-37
Identities = 164/210 (78%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || |||||||| ||||| | || || || || ||
Sbjct 1015421 CAAATTTTCGTAAAAACCTTAACCGGAAAAACAATCACATTAGAAGTTGAGTCTTCTGAT 1015480
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||||||| ||||||||| || |||||||| ||||| || |||||||||
Sbjct 1015481 ACGATCGACAACGTCAAAACAAAGATTCAAGATAAAGAAGGTATCCCACCAGACCAGCAA 1015540
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| ||||| ||||| || || | || || | ||||| ||| ||
Sbjct 1015541 CGCCTAATCTTCGCCGGTAAACAACTCGAGGACGGCCGCACACTGTCTGATTACAACATC 1015600
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|||||||| || || || || |||||||||
Sbjct 1015601 CAAAAAGAGTCTACCCTCCACCTTGTTTTG 1015630
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 177933 GTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAG 177992
|| || ||||| || || || || || ||||| ||||| || || || ||||||||
Sbjct 1015202 GTCAAGACTCTTACTGGCAAGACTATTACCCTTGAGGTCGAGTCTTCTGATACCATCGAC 1015261
Query 177993 AACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATC 178052
|| || ||| ||||| |||||||||||||| ||||| || |||||||||||| | |||
Sbjct 1015262 AATGTGAAAACCAAGATCCAGGACAAAGAAGGCATCCCCCCCGACCAGCAACGATTGATC 1015321
Query 178053 TTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAA 178112
||||| || ||||| ||||| ||||| | || || | ||||| ||| | || || ||
Sbjct 1015322 TTCGCTGGTAAACAACTCGAGGATGGTCGCACCCTCTCGGATTACAACATTCAGAAGGAG 1015381
Query 178113 TCAACACTGCATCTTGT 178129
|| || || || |||||
Sbjct 1015382 TCCACTCTCCACCTTGT 1015398
>seq5
Length=1732373
Score = 104 bits (114), Expect = 6e-17
Identities = 133/182 (73%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACC 177986
||||| || || ||||| || || || ||||| || ||||| || ||| || ||
Sbjct 840272 TTCGTTAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCGAGC---GATACA 840216
Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046
|| || || ||||| |||||||||||||| || || || || || ||||| || |||
Sbjct 840215 ATTGATAATGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCGCCAGACCAACAGCGA 840156
Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106
| || ||||||||||| ||||| || ||||| | ||| | ||||||||| |||||
Sbjct 840155 TTGATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTTTGAGCGATTATAATATCCAA 840096
Query 178107 AA 178108
||
Sbjct 840095 AA 840094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730598510566
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |