Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq9 134 1e-26
seq2 107 2e-18
seq5 82.4 7e-11
>seq9
Length=1275601
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || || || | |||| || || || ||||||||||| ||||| |||||||||
Sbjct 1015129 CCGCCACGGAGGCGGAGGACCAAGTGGAGGGTACTCTCCTTCTGGATGTTGTAGTCGGAG 1015070
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || ||||| || || ||||| |||| ||| |||||||| | ||
Sbjct 1015069 AGGGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAAATCAAGCGTTGTTGGTCTGGAGGG 1015010
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGACTCCAC 41814
| || ||||||||| ||| || ||| | | | | | || ||||| ||||| ||
Sbjct 1015009 ATGCCCTCCTTGTCTTGGATCTTAGTCTTAACATTATCA-ATGGTATCGCTGGACTCGAC 1014951
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || || || || ||||| ||||| ||||| ||||||||
Sbjct 1014950 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 1014903
Score = 98.7 bits (108), Expect = 9e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710
|| |||| ||||| |||||||| ||||| || || ||||| || || || || | ||
Sbjct 1015857 AAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAGTCTGAAAGCGTACGGCCATCT 1015798
Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770
|| || ||||||||||| || || |||||||||||||| | |||| | ||||| |||
Sbjct 1015797 TCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGAATACCTTCCTTATCC 1015738
Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829
||| |||||| | || | | | ||||| || || || || | || || ||
Sbjct 1015737 -TGAATTTTTGTCTTGACATTGTCAATCGTGTCCGAAGATTCAACTTCTAATGTGATGGT 1015679
Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || || || || || || |||||||||||
Sbjct 1015678 CTTGCCGGTAAGTGTTTTGACAAAAATCTGCAT 1015646
Score = 91.5 bits (100), Expect = 1e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| | || || || || ||| ||||||||||||||| || || |||
Sbjct 1015416 CCACCGCGAAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAATCCGAG 1015357
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || ||||| || || || ||||| |||| || || ||||| | |||
Sbjct 1015356 AGGGTGCGACCATCCTCGAGTTGTTTACCAGCGAAGATCAATCGTTGCTGGTCGGGGGGG 1015297
Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778
| || || |||||| ||| ||
Sbjct 1015296 ATGCCTTCTTTGTCCTGGATCTT 1015274
>seq2
Length=1931404
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | || || || || ||| ||||||||| ||||| ||||| |||
Sbjct 802235 CCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 802176
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || ||||| ||||||||||| ||||| ||||| ||||| | |||
Sbjct 802175 AGGGTGCGGCCATCCTCCAGCTGTTTGCCGGCGAAAATCAGACGCTGCTGGTCAGGGGGG 802116
Query 41756 ACGCTCTCCTTGTC 41769
| || |||||||||
Sbjct 802115 ATGCCCTCCTTGTC 802102
>seq5
Length=1732373
Score = 82.4 bits (90), Expect = 7e-11
Identities = 129/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
|||| || || ||||| ||| | ||||| | || || |||||||| |||||||| |
Sbjct 840092 CCTTTTGGATATTATAATCGCTCAAAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAAA 840151
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGAC 41791
||| ||||||||||| | |||| | |||||||||| || || ||| | | |
Sbjct 840152 TCAATCGCTGTTGGTCTGGCGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTAT 840211
Query 41792 GACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851
| | || ||||||||||| ||||| | || || || || || || || ||||| |||
Sbjct 840212 CA-ATTGTATCGCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTAACG 840270
Query 41852 AA 41853
||
Sbjct 840271 AA 840272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303774626800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |