Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq15420 118 1e-21 >seq15420 Length=311 Score = 118 bits (130), Expect = 1e-21 Identities = 196/282 (70%), Gaps = 1/282 (0%) Strand=Plus/Plus Query 54010 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 54069 |||||| |||| | || ||| || ||||| |||||||| |||||||| ||||| | || Sbjct 6 CCACTCGCCGTTCTTCTCCACACGCTTCATGAAGAGATCGGGAATCCAGAGAGC-AGGAA 64 Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129 || || | || | | || || || || ||||| || ||||||||| | | Sbjct 65 CAGGTCGCGGGCACGAGCCTCGTCCTTGCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAA 124 Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189 | |||| ||||| || |||| ||| |||| | | | || || || ||||| || || Sbjct 125 GACGTCAGCGTGCCATGGCTCCAGGTAGATGGCGAAAGCGCCGGGACGCTTGTTGCCACC 184 Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249 ||| || | ||| | ||| ||||| || | || | | ||| ||||| ||||||||||| Sbjct 185 CTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGAATGATACCATTGGA 244 Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT 54291 | || ||||| || | |||||| ||| ||||||| || Sbjct 245 CGTGCCGTTGGTGCCAGCAATATAGGAGCCAGTGGCACGGAT 286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593507355560640