Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq15009 114 1e-20 seq2256 91.5 2e-13 >seq15009 Length=544 Score = 114 bits (126), Expect = 1e-20 Identities = 136/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || || |||||| | || || || | |||||| | | Sbjct 502 TTCGTGAAGACCCTGACGGGTAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCATC 443 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| |||||| || || | ||||| |||||||| ||| | ||||| || || || Sbjct 442 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAACAGCGCCT 384 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| ||||| ||||| || || | |||||||| |||||||||||||||||| Sbjct 383 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCCGACTACAACATCCAGAA 324 Query 40878 GG 40879 || Sbjct 323 GG 322 >seq2256 Length=755 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/154 (73%), Gaps = 3/154 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||| |||||| || |||||||||| ||||| | |||||| Sbjct 154 ATCTGGCAGATGTACAAGAAGCACGAGGCTTCCTTCTGGACCGCTGAGGAAATCGACCTG 95 Query 116696 TCCAAGGACACGAGCGACTGGG---AGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| | | |||||||| | || | ||||| ||||| | |||||| | Sbjct 94 TCCAAGGATATGCACGACTGGGAAAACCGTCTCAACGATGACGAGAAATACTTCATCTCG 35 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCA 116786 ||| | || || || ||||||||| ||||||| Sbjct 34 CACATCCTCGCATTCTTCGCCGCCTCGGACGGCA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515033283151680