Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq15420 114 2e-20 >seq15420 Length=311 Score = 114 bits (126), Expect = 2e-20 Identities = 184/263 (70%), Gaps = 1/263 (0%) Strand=Plus/Plus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 || || ||||| |||||||| |||||||| ||||| | || || || | || | | | Sbjct 25 ACACGCTTCATGAAGAGATCGGGAATCCAGAGAGC-AGGAACAGGTCGCGGGCACGAGCC 83 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 || || || || ||||| || ||||||||| | | | |||| ||||| || Sbjct 84 TCGTCCTTGCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACGTCAGCGTGCCATGGC 143 Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201 |||| ||| ||||| | | | || || || ||||| || ||||| || | ||| | ||| Sbjct 144 TCCAGGTAGATGGCGAAAGCGCCGGGACGCTTGTTGCCACCCTGGTCGACGTAGCGAGCA 203 Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261 ||||| || | || | | ||| ||||| ||||||||||| | || ||||| || | Sbjct 204 GTGTTGTTGAAGACACGGAGCATGGGAATGATACCATTGGACGTGCCGTTGGTGCCAGCA 263 Query 72262 ATATAGCTTCCACTGGCACGAAT 72284 |||||| ||| ||||||| || Sbjct 264 ATATAGGAGCCAGTGGCACGGAT 286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670897019419680