Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq15420 98.7 1e-15 >seq15420 Length=311 Score = 98.7 bits (108), Expect = 1e-15 Identities = 121/164 (74%), Gaps = 1/164 (1%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || |||||| | ||| ||||| |||| || |||||||| ||| Sbjct 187 CAGGGTGGCAACAAGCGTCCCGGCGCTTTCGCCATCTACCTGGAGCCATGGCACGCTGAC 128 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| |||| || ||| ||| || ||||| || ||| | ||| Sbjct 127 GTCTTCGAGTTCCTCGACCTGCGGAAGAACCACGGCAAGGACGAGGCTCGTGCCCGCGAC 68 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT 97039 |||| ||| |||||| | || ||| | ||||||||||| || Sbjct 67 CTGTTCC-TGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGT 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740791788787680