Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq5788 113 4e-20 >seq5788 Length=545 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||| ||||| || || | |||||| ||| || | ||| || ||| | || Sbjct 245 TTGACAACCTGGAACTCACCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTAAGGC 304 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| ||||||| ||| || | ||||| || ||||||||| ||||| | Sbjct 305 TCGAAGCACTCGTTGTTGCCCAAGATCTGCGAGGTCGAGGCAGTGGGCATGGGCGCCATC 364 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | || ||||| | |||||||| |||||| | |||| || | | |||| ||||| Sbjct 365 AGCAAGCTGTTGCGGATGCCGTGCTCCTTGATCTTGGCCTTGAGGGCATCCCAGTCCCAC 424 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTG 145272 || | || | || |||||||||||||||| Sbjct 425 AGGTTGCTGGGAGTAACACCCCACATGTCGTACTG 459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471842474181120